Abstract
Few-shot semantic segmentation is a promising solution for scarce data scenarios, especially for medical imaging challenges with limited training data. However, most of the existing few-shot segmentation methods tend to over rely on the images containing target classes, which may hinder its utilization of medical imaging data. In this paper, we present a few-shot segmentation model that employs anatomical auxiliary information from medical images without target classes for dual contrastive learning. The dual contrastive learning module performs comparison among vectors from the perspectives of prototypes and contexts, to enhance the discriminability of learned features and the data utilization. Besides, to distinguish foreground features from background features more friendly, a constrained iterative prediction module is designed to optimize the segmentation of the query image. Experiments on two medical image datasets show that the proposed method achieves performance comparable to state-of-the-art methods. Code is available at: https://github.com/cvszusparkle/AAS-DCL_FSS.
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References
Achanta, R., Shaji, A., Smith, K., Lucchi, A., Fua, P., Süsstrunk, S.: Slic superpixels. Technical report (2010)
Van den Bergh, M., Boix, X., Roig, G., de Capitani, B., Van Gool, L.: SEEDS: superpixels extracted via energy-driven sampling. In: Fitzgibbon, A., Lazebnik, S., Perona, P., Sato, Y., Schmid, C. (eds.) ECCV 2012. LNCS, vol. 7578, pp. 13–26. Springer, Heidelberg (2012). https://doi.org/10.1007/978-3-642-33786-4_2
Boudiaf, M., Kervadec, H., Masud, Z.I., Piantanida, P., Ben Ayed, I., Dolz, J.: Few-shot segmentation without meta-learning: a good transductive inference is all you need? In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 13979–13988 (2021)
Chen, T., Kornblith, S., Norouzi, M., Hinton, G.: A simple framework for contrastive learning of visual representations. In: International Conference on Machine Learning, pp. 1597–1607. PMLR (2020)
Chen, X., Fan, H., Girshick, R., He, K.: Improved baselines with momentum contrastive learning. arXiv preprint arXiv:2003.04297 (2020)
Dong, N., Xing, E.P.: Few-shot semantic segmentation with prototype learning. In: BMVC, vol. 3 (2018)
Fang, X., Yan, P.: Multi-organ segmentation over partially labeled datasets with multi-scale feature abstraction. IEEE Trans. Med. Imaging 39(11), 3619–3629 (2020)
Felzenszwalb, P.F., Huttenlocher, D.P.: Efficient graph-based image segmentation. Int. J. Comput. Vis. 59(2), 167–181 (2004)
Feng, R., et al.: Interactive few-shot learning: limited supervision, better medical image segmentation. IEEE Trans. Med. Imaging (2021)
Gao, Y., Fei, N., Liu, G., Lu, Z., Xiang, T.: Contrastive prototype learning with augmented embeddings for few-shot learning. In: Uncertainty in Artificial Intelligence, pp. 140–150. PMLR (2021)
Grill, J.B., et al.: Bootstrap your own latent-a new approach to self-supervised learning. Adv. Neural. Inf. Process. Syst. 33, 21271–21284 (2020)
He, K., Fan, H., Wu, Y., Xie, S., Girshick, R.: Momentum contrast for unsupervised visual representation learning. In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 9729–9738 (2020)
Khosla, P., et al.: Supervised contrastive learning. Adv. Neural. Inf. Process. Syst. 33, 18661–18673 (2020)
Kim, S., An, S., Chikontwe, P., Park, S.H.: Bidirectional RNN-based few shot learning for 3D medical image segmentation. arXiv preprint arXiv:2011.09608 (2020)
Kwon, H., Jeong, S., Kim, S., Sohn, K.: Dual prototypical contrastive learning for few-shot semantic segmentation. arXiv preprint arXiv:2111.04982 (2021)
Landman, B., Xu, Z., Igelsias, J.E., Styner, M., Langerak, T., Klein, A.: Miccai multi-atlas labeling beyond the cranial vault-workshop and challenge. In: Proceedings of the MICCAI: Multi-Atlas Labeling Beyond Cranial Vault-Workshop Challenge (2015)
Li, G., Jampani, V., Sevilla-Lara, L., Sun, D., Kim, J., Kim, J.: Adaptive prototype learning and allocation for few-shot segmentation. In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 8334–8343 (2021)
Li, Y., Data, G.W.P., Fu, Y., Hu, Y., Prisacariu, V.A.: Few-shot semantic segmentation with self-supervision from pseudo-classes. arXiv preprint arXiv:2110.11742 (2021)
Liu, C., et al.: Learning a few-shot embedding model with contrastive learning. In: Proceedings of the AAAI Conference on Artificial Intelligence, vol. 35, pp. 8635–8643 (2021)
Liu, W., Wu, Z., Ding, H., Liu, F., Lin, J., Lin, G.: Few-shot segmentation with global and local contrastive learning. arXiv preprint arXiv:2108.05293 (2021)
Liu, Y., Zhang, X., Zhang, S., He, X.: Part-aware prototype network for few-shot semantic segmentation. In: Vedaldi, A., Bischof, H., Brox, T., Frahm, J.-M. (eds.) ECCV 2020. LNCS, vol. 12354, pp. 142–158. Springer, Cham (2020). https://doi.org/10.1007/978-3-030-58545-7_9
Lu, Z., He, S., Zhu, X., Zhang, L., Song, Y.Z., Xiang, T.: Simpler is better: few-shot semantic segmentation with classifier weight transformer. In: Proceedings of the IEEE/CVF International Conference on Computer Vision, pp. 8741–8750 (2021)
Majumder, O., Ravichandran, A., Maji, S., Achille, A., Polito, M., Soatto, S.: Supervised momentum contrastive learning for few-shot classification. arXiv preprint arXiv:2101.11058 (2021)
Mondal, A.K., Dolz, J., Desrosiers, C.: Few-shot 3D multi-modal medical image segmentation using generative adversarial learning. arXiv preprint arXiv:1810.12241 (2018)
Moore, A.P., Prince, S.J., Warrell, J., Mohammed, U., Jones, G.: SuperPixel lattices. In: 2008 IEEE Conference on Computer Vision and Pattern Recognition, pp. 1–8. IEEE (2008)
Van den Oord, A., Li, Y., Vinyals, O.: Representation learning with contrastive predictive coding. arXiv e-prints pp. arXiv-1807 (2018)
Ouali, Y., Hudelot, C., Tami, M.: Spatial contrastive learning for few-shot classification. In: Oliver, N., Pérez-Cruz, F., Kramer, S., Read, J., Lozano, J.A. (eds.) ECML PKDD 2021. LNCS (LNAI), vol. 12975, pp. 671–686. Springer, Cham (2021). https://doi.org/10.1007/978-3-030-86486-6_41
Ouyang, C., Biffi, C., Chen, C., Kart, T., Qiu, H., Rueckert, D.: Self-supervision with superpixels: training few-shot medical image segmentation without annotation. In: Vedaldi, A., Bischof, H., Brox, T., Frahm, J.-M. (eds.) ECCV 2020. LNCS, vol. 12374, pp. 762–780. Springer, Cham (2020). https://doi.org/10.1007/978-3-030-58526-6_45
Rakelly, K., Shelhamer, E., Darrell, T., Efros, A.A., Levine, S.: Few-shot segmentation propagation with guided networks. arXiv preprint arXiv:1806.07373 (2018)
Roy, A.G., Navab, N., Wachinger, C.: Recalibrating fully convolutional networks with spatial and channel “squeeze and excitation" blocks. IEEE Trans. Med. Imaging 38(2), 540–549 (2018)
Roy, A.G., Siddiqui, S., Pölsterl, S., Navab, N., Wachinger, C.: ‘squeeze & excite’guided few-shot segmentation of volumetric images. Med. Image Anal. 59, 101587 (2020)
Shaban, A., Bansal, S., Liu, Z., Essa, I., Boots, B.: One-shot learning for semantic segmentation. arXiv preprint arXiv:1709.03410 (2017)
Shen, X., Zhang, G., Lai, H., Luo, J., Lu, J., Luo, Y.: PoissonSeg: semi-supervised few-shot medical image segmentation via poisson learning. In: 2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), pp. 1513–1518. IEEE (2021)
Shi, G., Xiao, L., Chen, Y., Zhou, S.K.: Marginal loss and exclusion loss for partially supervised multi-organ segmentation. Med. Image Anal. 70, 101979 (2021)
Sun, L., et al.: Few-shot medical image segmentation using a global correlation network with discriminative embedding. Comput. Biol. Med. 140, 105067 (2022)
Tang, H., Liu, X., Sun, S., Yan, X., Xie, X.: Recurrent mask refinement for few-shot medical image segmentation. arXiv preprint arXiv:2108.00622 (2021)
Tian, Z., Zhao, H., Shu, M., Yang, Z., Li, R., Jia, J.: Prior guided feature enrichment network for few-shot segmentation. IEEE Trans. Pattern Anal. Mach. Intell. (2020)
Valindria, V.V., et al.: Multi-modal learning from unpaired images: application to multi-organ segmentation in CT and MRI. In: 2018 IEEE Winter Conference on Applications of Computer Vision (WACV), pp. 547–556. IEEE (2018)
Wang, H., Zhang, X., Hu, Y., Yang, Y., Cao, X., Zhen, X.: Few-shot semantic segmentation with democratic attention networks. In: Vedaldi, A., Bischof, H., Brox, T., Frahm, J.-M. (eds.) ECCV 2020. LNCS, vol. 12358, pp. 730–746. Springer, Cham (2020). https://doi.org/10.1007/978-3-030-58601-0_43
Wang, K., Liew, J.H., Zou, Y., Zhou, D., Feng, J.: PANet: Few-shot image semantic segmentation with prototype alignment. In: Proceedings of the IEEE/CVF International Conference on Computer Vision, pp. 9197–9206 (2019)
Wei, Y., Tian, J., Zhong, C., Shi, Z.: AKFNET: an anatomical knowledge embedded few-shot network for medical image segmentation. In: 2021 IEEE International Conference on Image Processing (ICIP), pp. 11–15. IEEE (2021)
Wu, Z., Efros, A.A., Yu, S.X.: Improving generalization via scalable neighborhood component analysis. In: European Conference on Computer Vision, pp. 685–701 (2018)
Xiao, J., Xu, H., Zhao, W., Cheng, C., Gao, H.: A prior-mask-guided few-shot learning for skin lesion segmentation. Computing, pp. 1–23 (2021)
Yang, B., Liu, C., Li, B., Jiao, J., Ye, Q.: Prototype mixture models for few-shot semantic segmentation. In: Vedaldi, A., Bischof, H., Brox, T., Frahm, J.-M. (eds.) ECCV 2020. LNCS, vol. 12353, pp. 763–778. Springer, Cham (2020). https://doi.org/10.1007/978-3-030-58598-3_45
Yu, Q., Dang, K., Tajbakhsh, N., Terzopoulos, D., Ding, X.: A location-sensitive local prototype network for few-shot medical image segmentation. In: 2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI), pp. 262–266. IEEE (2021)
Zhang, B., Xiao, J., Qin, T.: Self-guided and cross-guided learning for few-shot segmentation. In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 8312–8321 (2021)
Zhang, C., Lin, G., Liu, F., Yao, R., Shen, C.: CANet: Class-agnostic segmentation networks with iterative refinement and attentive few-shot learning. In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognitionm, pp. 5217–5226 (2019)
Zhang, D., Huang, G., Zhang, Q., Han, J., Han, J., Yu, Y.: Cross-modality deep feature learning for brain tumor segmentation. Pattern Recogn. 110, 107562 (2021)
Zhang, L., et al.: Generalizing deep learning for medical image segmentation to unseen domains via deep stacked transformation. IEEE Trans. Med. Imaging 39(7), 2531–2540 (2020)
Zhang, X., Wei, Y., Yang, Y., Huang, T.S.: SG-One: similarity guidance network for one-shot semantic segmentation. IEEE Trans. Cybern. 50(9), 3855–3865 (2020)
Zhao, A., Balakrishnan, G., Durand, F., Guttag, J.V., Dalca, A.V.: Data augmentation using learned transformations for one-shot medical image segmentation. In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 8543–8553 (2019)
Acknowledgments
This work was supported in part by the National Natural Science Foundation of China under Grant 61973221 and Grant 62273241, the Natural Science Foundation of Guangdong Province of China under Grant 2018A030313381 and Grant 2019A1515011165.
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Wu, H., Xiao, F., Liang, C. (2022). Dual Contrastive Learning with Anatomical Auxiliary Supervision for Few-Shot Medical Image Segmentation. In: Avidan, S., Brostow, G., Cissé, M., Farinella, G.M., Hassner, T. (eds) Computer Vision – ECCV 2022. ECCV 2022. Lecture Notes in Computer Science, vol 13680. Springer, Cham. https://doi.org/10.1007/978-3-031-20044-1_24
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