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Fusion-Based Automated Segmentation in Head and Neck Cancer via Advance Deep Learning Techniques

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Head and Neck Tumor Segmentation and Outcome Prediction (HECKTOR 2022)

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 13626))

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Abstract

Background: Accurate prognostic stratification and segmentation of Head-and-Neck Squamous-Cell-Carcinoma (HNSCC) patients can be an important clinical reference when designing therapeutic strategies. We set to automatically segment HNSCC using advanced deep learning techniques linked to the image fusion technique.

Method: 883 subjects were extracted from HECKTOR-Challenge. 524 subjects were considered for the training and validation procedure, and 359 subjects as external testing were employed to validate our segmentation models. First, PET images were registered to CT images. The resultant images are cropped after an enhancement procedure. Subsequently, a weighted fusion technique was employed to combine PET and CT information. To this end, we developed a Cascade-Net consisting of two states of art neural networks to segment the tumors via the fused image. Our segmentation framework performs in three main stages. In the first stage, which is an organ localizer module, a candidate segmentation region of interest (ROIs) for each organ is generated. The second stage is a 3D U-Net refinement organ segmentation which produces a more robust and accurate contour from the previous coarse segmentation mask. This network is equipped with an attention mechanism on skip connections and a deep supervision concept that generates ROIs by eliminating irrelevant background information. This network will identify the probability of the presence of each organ. In the last stage, the extracted regions will be fed to the 3D ResU-Net to generate a fine segmentation. The performance of the proposed framework was evaluated through well-established quantitative metrics such as the dice similarity coefficient.

Result: Using the weighted fusion technique linked with Cascade-Net, our method provided the average dice score of 0.71. Moreover, this algorithm resulted in dice score of 0.74, and 0.68 for the primary gross tumor volume (GTVp) and metastatic nodes (GTVn), respectively.

Conclusion: We demonstrated that using the fusion technique followed by an appropriate automatic segmentation technique provides a good performance.

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Acknowledgement

This study was supported by Technological Virtual Collaboration Corporation (TECVICO Corp.) located in Vancouver, BC, Canada.

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Correspondence to Mohammad R. Salmanpour .

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All codes are publicly shared at: https://github.com/Tecvico.

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The authors have no relevant conflicts of interest to disclose.

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Rezaeijo, S.M., Harimi, A., Salmanpour, M.R. (2023). Fusion-Based Automated Segmentation in Head and Neck Cancer via Advance Deep Learning Techniques. In: Andrearczyk, V., Oreiller, V., Hatt, M., Depeursinge, A. (eds) Head and Neck Tumor Segmentation and Outcome Prediction. HECKTOR 2022. Lecture Notes in Computer Science, vol 13626. Springer, Cham. https://doi.org/10.1007/978-3-031-27420-6_7

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  • DOI: https://doi.org/10.1007/978-3-031-27420-6_7

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