Abstract
In this article, we present the main lines of an ongoing research project funded by the Spanish government. The project proposes research on visual analytics techniques for solving complex problems in engineering and biomedicine. We outline the characteristics of complex problems that make it difficult for machine learning approaches to tackle them. Next, we present the benefits of solutions that exploit the synergy between machine learning and data visualization through interactive mechanisms for solving such problems. Finally, we briefly present the approaches being worked on in this project to achieve the objectives and the results achieved so far. We hope that these ideas and approaches will serve as inspiration for other projects or applications in the field.
This work was supported by the Ministerio de Ciencia e Innovación / Agencia Estatal de Investigación (MCIN/AEI/ 10.13039/501100011033) grant [PID2020-115401GB-I00].
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
(many authors): Pan-cancer analysis of whole genomes. Nature 578(7793), 82–93 (2020)
Belhadi, A., Zkik, K., Cherrafi, A., Sha’ri, M.Y., et al.: Understanding big data analytics for manufacturing processes: insights from literature review and multiple case studies. Comput. Indust. Eng. 137, 106099 (2019)
Carter, S., Nielsen, M.: Using artificial intelligence to augment human intelligence. Distill 2(12), e9 (2017)
Celada, L., et al.: Differential hif2\(\alpha \) protein expression in human carotid body and adrenal medulla under physiologic and tumorigenic conditions. Cancers 14(12), 2986 (2022)
Chandola, V., Banerjee, A., Kumar, V.: Anomaly detection: a survey. ACM Comput. Surv. (CSUR) 41(3), 1–58 (2009)
Díaz, I., Cuadrado, A.A., Diez, A.B., Domínguez, M., Fuertes, J.J., Prada, M.A.: Visualization of changes in process dynamics using self-organizing maps. In: Diamantaras, K., Duch, W., Iliadis, L.S. (eds.) ICANN 2010. LNCS, vol. 6353, pp. 343–352. Springer, Heidelberg (2010). https://doi.org/10.1007/978-3-642-15822-3_42
Díaz, I., Hollmen, J.: Residual generation and visualization for understanding novel process conditions. In: Proceedings of the International Joint Conference on Neural Networks (IJCNN 2002), vol. 3, pp. 2070–2075. Honolulu, Hawaii (USA) (2002)
Díaz, I., Cuadrado, A.A., Diez, A.B., Loredo, L.R., Carrera, F.O., Rodríguez, J.A.: Visual predictive maintenance tool based on SOM projection techniques. Revue de Metallurgie-Cahiers d Informations Tech. 103(3), 307–315 (2003). https://doi.org/10.1051/metal:2003179
Díaz, I., Cuadrado, A.A., Pérez, D., Domínguez, M., Alonso, S., Prada, M.A.: Energy analytics in public buildings using interactive histograms. Energy Build. 134(1), 94–104 (2017). https://doi.org/10.1016/j.enbuild.2016.10.026
Díaz, I., Cuadrado, A.A., Pérez, D., García, F.J., Verleysen, M.: Interactive dimensionality reduction for visual analytics. In: European Symposium on Artificial Neural Networks, Computational Intelligence and Machine Learning. Bruges, Belgium (2014)
Díaz, I., Domínguez, M., Cuadrado, A.A., Diez, A.B., Fuertes, J.J.: Morphingprojections: Interactive visualization of electric power demand time series. In: Meyer, M., (Editors), T.W. (eds.) Eurographics Conference on Visualization (EuroVis) (2012), pp. 121–125. Viena (Austria) (2012)
Díaz, I., et al.: Exploratory analysis of the gene expression matrix based on dual conditional dimensionality reduction. IEEE J. Biomed. Health Inform. PP, 1–10 (2023). https://doi.org/10.1109/JBHI.2023.3264029
Díaz, I., et al.: Morphing Projections: a new visual technique for fast and interactive large-scale analysis of biomedical datasets. Bioinformatics 37(11), 1571–1580 (2020). https://doi.org/10.1093/bioinformatics/btaa989
Díaz, I., Enguita, J.M., García, D., Cuadrado, A.A., González, A., Domínguez, M.: Modelado de series temporales mediante echo state networks para aplicaciones de analítica visual. In: XVII Simposio CEA de Control Inteligente. CEA-IFAC, CEA-IFAC (2022)
Blanco, I.D., et al.: Interactive dual projections for gene expression analysis. In: ESANN 2022 Proceedings, pp. 439–444 (2022)
Endert, A., et al.: The state of the art in integrating machine learning into visual analytics. Comput. Graph. Forum 36(8), 458–486 (2017). https://doi.org/10.1111/cgf.13092
Enguita-Gonzalez, J.M., et al.: Interactive visual analytics for medical data: application to covid-19 clinical information during the first wave. In: ESANN 2022 Proceedings, pp. 451–456 (2022)
Fuertes, J.J., Domínguez, M., Reguera, P., Prada, M.A., Díaz, I., Cuadrado, A.A.: Visual dynamic model based on self-organizing maps for supervision and fault detection in industrial processes. Eng. Appl. Artif. Intell. 23(1), 8–17 (2010). https://doi.org/10.1016/j.engappai.2009.06.001
González-Muñiz, A., Díaz, I., Cuadrado, A.A., García-Pérez, D.: Health indicator for machine condition monitoring built in the latent space of a deep autoencoder. Reliability Eng. Syst. Safety 224, 108482 (2022)
González-Muñiz, A., Díaz, I., Cuadrado, A.A., García-Pérez, D., Pérez, D.: Two-step residual-error based approach for anomaly detection in engineering systems using variational autoencoders. Comput. Electr. Eng. 101, 108065 (2022)
González, D., Cuadrado, A.A., Díaz, I., García, F.J., Diez, A.B., Fuertes, J.J.: Visual analysis of residuals from data-based models in complex industrial processes. Int. J. Modern Phys. B 26(25), 1–9 (2012). https://doi.org/10.1142/S0217979212460022
González-Muñiz, A., Díaz, I., Cuadrado, A.A.: DCNN for condition monitoring and fault detection in rotating machines and its contribution to the understanding of machine nature. Heliyon 6(2), e03395 (2020). https://doi.org/10.1016/j.heliyon.2020.e03395
Goodfellow, I., Bengio, Y., Courville, A.: Deep learning. MIT press (2016)
Holzinger, A., Langs, G., Denk, H., Zatloukal, K., Müller, H.: Causability and explainability of artificial intelligence in medicine. Wiley Interdiscip. Rev.: Data Min. Knowl. Disc. 9(4), e1312 (2019)
Hospitales, H.: Covid data save lives (2022). https://www.hmhospitales.com/coronavirus/covid-data-save-lives
Hutter, C., Zenklusen, J.C.: The cancer genome atlas: creating lasting value beyond its data. Cell 173(2), 283–285 (2018)
Kingma, D.P., Welling, M.: Auto-encoding variational Bayes. arXiv preprint arXiv:1312.6114 (2013)
Kobak, D., Berens, P.: The art of using t-SNE for single-cell transcriptomics. Nat. Commun. 10(1), 1–14 (2019)
Kohonen, T.: Self-Organizing Maps, Springer Series in Information Sciences, vol. 30. New York, third extended edition edn, Springer, Berlin, Heidelberg (2001). https://doi.org/10.1007/978-3-642-56927-2
Liu, Y., Jun, E., Li, Q., Heer, J.: Latent space cartography: visual analysis of vector space embeddings. Comput. Graph. Forum 38(3), 67–78 (2019). https://doi.org/10.1111/cgf.13672
Van der Maaten, L., Hinton, G.: Visualizing data using t-SNE. J. Mach. Learn. Res. 9(11), 2579–2605 (2008)
McInnes, L., Healy, J., Melville, J.: UMAP: uniform manifold approximation and projection for dimension reduction. arXiv preprint arXiv:1802.03426 (2018)
Müller, F.J., et al.: A bioinformatic assay for pluripotency in human cells. Nat. Methods 8(4), 315–317 (2011)
Mobley, R.K.: An introduction to predictive maintenance. Elsevier (2002)
Murdoch, W.J., Singh, C., Kumbier, K., Abbasi-Asl, R., Yu, B.: Definitions, methods, and applications in interpretable machine learning. Proc. Natl. Acad. Sci. 116(44), 22071–22080 (2019)
Pimentel, M.A., Clifton, D.A., Clifton, L., Tarassenko, L.: A review of novelty detection. Signal Process. 99, 215–249 (2014)
Roscher, R., Bohn, B., Duarte, M.F., Garcke, J.: Explainable machine learning for scientific insights and discoveries. IEEE Access 8, 42200–42216 (2020)
Sommer, C., Hoefler, R., Samwer, M., Gerlich, D.W.: A deep learning and novelty detection framework for rapid phenotyping in high-content screening. Mol. Biol. Cell 28(23), 3428–3436 (2017)
Van Wijk, J.: The value of visualization. In: 16th IEEE Visualization 2005 (VIS 2005). IEEE Computer Society (2005)
Wang, J., Xu, C., Zhang, J., Zhong, R.: Big data analytics for intelligent manufacturing systems: a review. J. Manuf. Syst. 62, 738–752 (2022)
Zhang, J., et al.: Viral pneumonia screening on chest X-ray images using confidence-aware anomaly detection. arXiv preprint arXiv:2003.12338 (2020)
Zihni, E., et al.: Opening the black box of artificial intelligence for clinical decision support: a study predicting stroke outcome. PLoS ONE 15(4), e0231166 (2020)
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2023 IFIP International Federation for Information Processing
About this paper
Cite this paper
Díaz, I., Enguita, J.M., Cuadrado, A.A., García, D., González, A. (2023). Visual Analytics Tools for the Study of Complex Problems in Engineering and Biomedicine. In: Maglogiannis, I., Iliadis, L., Papaleonidas, A., Chochliouros, I. (eds) Artificial Intelligence Applications and Innovations. AIAI 2023 IFIP WG 12.5 International Workshops. AIAI 2023. IFIP Advances in Information and Communication Technology, vol 677. Springer, Cham. https://doi.org/10.1007/978-3-031-34171-7_36
Download citation
DOI: https://doi.org/10.1007/978-3-031-34171-7_36
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-031-34170-0
Online ISBN: 978-3-031-34171-7
eBook Packages: Computer ScienceComputer Science (R0)