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Bioinformatics and Biomedical Engineering

10th International Work-Conference, IWBBIO 2023, Meloneras, Gran Canaria, Spain, July 12–14, 2023, Proceedings, Part II

  • Conference proceedings
  • © 2023

Overview

Editors:
  1. Ignacio Rojas

    1. University of Granada, Granada, Spain

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  2. Olga Valenzuela

    1. University of Granada, Granada, Spain

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  3. Fernando Rojas Ruiz

    1. University of Granada, Granada, Spain

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  4. Luis Javier Herrera

    1. University of Granada, Granada, Spain

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  5. Francisco Ortuño

    1. University of Granada, Granada, Spain

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Part of the book series: Lecture Notes in Computer Science (LNCS, volume 13920)

Part of the book sub series: Lecture Notes in Bioinformatics (LNBI)

Included in the following conference series:

Conference proceedings info: IWBBIO 2023.

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Table of contents (35 papers)

  1. Front Matter

    Pages i-xxix
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  2. Feature Selection, Extraction, and Data Mining in Bioinformatics

    1. Front Matter

      Pages 1-1
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    2. Agent Based Modeling of Fish Shoal Behavior

      • Pavla Urbanova, Ievgen Koliada, Petr Císař, Miloš Železný
      Pages 3-13

    3. Entropy Approach of Processing for Fish Acoustic Telemetry Data to Detect Atypical Behavior During Welfare Evaluation

      • Jan Urban
      Pages 14-26

    4. Determining HPV Status in Patients with Oropharyngeal Cancer from 3D CT Images Using Radiomics: Effect of Sampling Methods

      • Kubra Sarac, Albert Guvenis
      Pages 27-41

    5. MetaLLM: Residue-Wise Metal Ion Prediction Using Deep Transformer Model

      • Fairuz Shadmani Shishir, Bishnu Sarker, Farzana Rahman, Sumaiya Shomaji
      Pages 42-55

  3. Genome-Phenome Analysis

    1. Front Matter

      Pages 57-57
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    2. Prediction of Functional Effects of Protein Amino Acid Mutations

      • Óscar Álvarez-Machancoses, Eshel Faraggi, Enrique J. de Andrés-Galiana, Juan Luis Fernández-Martínez, Andrzej Kloczkowski
      Pages 59-71

    3. Optimizing Variant Calling for Human Genome Analysis: A Comprehensive Pipeline Approach

      • Miguel Pinheiro, Jorge Miguel Silva, José Luis Oliveira
      Pages 72-85

  4. Healthcare and Diseases

    1. Front Matter

      Pages 87-87
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    2. Improving Fetal Health Monitoring: A Review of the Latest Developments and Future Directions

      • Restuning Widiasih, Hasballah Zakaria, Siti Saidah Nasution, Saffan Firdaus, Risma Dwi Nur Pratiwi
      Pages 89-109

    3. Deep Learning for Parkinson’s Disease Severity Stage Prediction Using a New Dataset

      • Zainab Maalej, Fahmi Ben Rejab, Kaouther Nouira
      Pages 110-123

    4. Improved Long-Term Forecasting of Emergency Department Arrivals with LSTM-Based Networks

      • Carolina Miranda-Garcia, Alberto Garces-Jimenez, Jose Manuel Gomez-Pulido, Helena Hernández-Martínez
      Pages 124-133

  5. High-Throughput Genomics: Bioinformatic Tools and Medical Applications

    1. Front Matter

      Pages 135-135
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    2. Targeted Next Generation Sequencing of a Custom Capture Panel to Target Sequence 112 Cancer Related Genes in Breast Cancer Tumors ERBB2 Positive from Lleida (Spain)

      • Iván Benítez, Izaskun Urdanibia, Xavier Matias-Guiu, Ariadna Gasol, Ana Serrate, Serafín Morales et al.
      Pages 137-150

    3. An Accurate Algorithm for Identifying Mutually Exclusive Patterns on Multiple Sets of Genomic Mutations

      • Siyu He, Jiayin Wang, Zhongmeng Zhao, Xuanping Zhang
      Pages 151-164

    4. A 20-Year Journey of Tracing the Development of Web Catalogues for Rare Diseases

      • João Rafael Almeida, José Luís Oliveira
      Pages 165-179

    5. Unsupervised Investigation of Information Captured in Pathway Activity Score in scRNA-Seq Analysis

      • Kamila Szumala, Joanna Polanska, Joanna Zyla
      Pages 180-192

    6. Meta-analysis of Gene Activity (MAGA) Contributions and Correlation with Gene Expression, Through GAGAM

      • Lorenzo Martini, Roberta Bardini, Alessandro Savino, Stefano Di Carlo
      Pages 193-207

    7. Predicting Papillary Renal Cell Carcinoma Prognosis Using Integrative Analysis of Histopathological Images and Genomic Data

      • Shaira L. Kee, Michael Aaron G. Sy, Samuel P. Border, Nicholas J. Lucarelli, Akshita Gupta, Pinaki Sarder et al.
      Pages 208-221
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Keywords

About this book

This volume constitutes the proceedings of the 10th International Work-Conference on IWBBIO 2023, held in Meloneras, Gran Canaria, Spain, during July 12-14, 2022.
The total of 79 papers presented in the proceedings, was carefully reviewed and selected from 209 submissions. The papers cove the latest ideas and realizations in the foundations, theory, models, and applications for interdisciplinary and multidisciplinary research encompassing disciplines of computer science, mathematics, statistics, biology, bioinformatics, and biomedicine.

Editors and Affiliations

  • University of Granada, Granada, Spain

    Ignacio Rojas, Olga Valenzuela, Fernando Rojas Ruiz, Luis Javier Herrera, Francisco Ortuño

Bibliographic Information

  • Book Title: Bioinformatics and Biomedical Engineering

  • Book Subtitle: 10th International Work-Conference, IWBBIO 2023, Meloneras, Gran Canaria, Spain, July 12–14, 2023, Proceedings, Part II

  • Editors: Ignacio Rojas, Olga Valenzuela, Fernando Rojas Ruiz, Luis Javier Herrera, Francisco Ortuño

  • Series Title: Lecture Notes in Computer Science

  • DOI: https://doi.org/10.1007/978-3-031-34960-7

  • Publisher: Springer Cham

  • eBook Packages: Computer Science, Computer Science (R0)

  • Copyright Information: The Editor(s) (if applicable) and The Author(s), under exclusive license to Springer Nature Switzerland AG 2023

  • Softcover ISBN: 978-3-031-34959-1Published: 29 June 2023

  • eBook ISBN: 978-3-031-34960-7Published: 28 June 2023

  • Series ISSN: 0302-9743

  • Series E-ISSN: 1611-3349

  • Edition Number: 1

  • Number of Pages: XXIX, 508

  • Number of Illustrations: 19 b/w illustrations, 180 illustrations in colour

  • Topics: Bioinformatics, Biomedical Engineering and Bioengineering, Computer Communication Networks, Data Engineering, Data Engineering

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