Skip to main content

Developing Large Pre-trained Model for Breast Tumor Segmentation from Ultrasound Images

  • Conference paper
  • First Online:
Medical Image Computing and Computer Assisted Intervention – MICCAI 2023 (MICCAI 2023)

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 14226))

  • 3118 Accesses

Abstract

Early detection and diagnosis of breast cancer using ultrasound images are crucial for timely diagnostic decision and treatment in clinical application. However, the similarity between tumors and background and also severe shadow noises in ultrasound images make accurate segmentation of breast tumor challenging. In this paper, we propose a large pre-trained model for breast tumor segmentation, with robust performance when applied to new datasets. Specifically, our model is built upon UNet backbone with deep supervision for each stage of the decoder. Besides using Dice score, we also design discriminator-based loss on each stage of the decoder to penalize the distribution dissimilarity from multi-scales. Our proposed model is validated on a large clinical dataset with more than 10000 cases, and shows significant improvement than other representative models. Besides, we apply our large pretrained model to two public datasets without fine tuning, and obtain extremely good results. This indicates great generalizability of our large pre-trained model, as well as robustness to multi-site data. The code is publicly available at https://github.com/limy-ulab/US-SEG.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Siegel, R.L., Miller, K.D., Fuchs, H.E., Jemal, A.: Cancer statistics. CA: Cancer J. Clin. 72(1), 7–33 (2022)

    Google Scholar 

  2. Arnold, M., Morgan, E., Rumgay, H., Mafra, A., Singh, D., Laversanne, M., et al.: Current and future burden of breast cancer: global statistics for 2020 and 2040. Breast 66, 15–23 (2022)

    Article  Google Scholar 

  3. Berg, W.A., Zhang, Z., Lehrer, D., Jong, R.A., Pisano, E.D., Barr, R.G., et al.: Detection of breast cancer with addition of annual screening ultrasound or a single screening MRI to mammography in women with elevated breast cancer risk. J. Am. Med. Assoc. (JAMA) 307(13), 1394–1404 (2012)

    Article  Google Scholar 

  4. Kalager, M., Haldorsen, T., Bretthauer, M., Hoff, G., Thoresen, S.O., Adami, H.O.: Improved breast cancer survival following introduction of an organized mammography screening program among both screened and unscreened women: a population-based cohort study. Breast Cancer Res. BCR 11(4), 1–9 (2009)

    Article  Google Scholar 

  5. Cheng, H.D., Shan, J., Ju, W., Guo, Y., Zhang, L.: Automated breast cancer detection and classification using ultrasound images: a survey. Pattern Recogn. 43(1), 299–317 (2010)

    Article  MATH  Google Scholar 

  6. Kratkiewicz, K., Pattyn, A., Alijabbari, N., Mehrmohammadi, M.: Ultrasound and photoacoustic imaging of breast cancer: clinical systems, challenges, and future outlook. J. Clin. Med. 11(5), 1165 (2022)

    Article  Google Scholar 

  7. Ragab, M., Albukhari, A., Alyami, J., Mansour, R.F.: Ensemble deep-learning-enabled clinical decision support system for breast cancer diagnosis and classification on ultrasound images. Biology (Basel) 11(3), 439 (2022)

    Google Scholar 

  8. Xian, M., Zhang, Y., Cheng, H.-D., Xu, F., Zhang, B., Ding, J.: Automatic breast ultrasound image segmentation: a survey. Pattern Recogn. 79, 340–355 (2018)

    Article  Google Scholar 

  9. Calas, M.J.G., Almeida, R.M.V.R., Gutfilen, B., Pereira, W.C.A.: Intraobserver interpretation of breast ultrasonography following the BI-RADS classification. Eur. J. Radiol. 74(3), 525–528 (2010)

    Article  Google Scholar 

  10. Yap, M.H., Edirisinghe, E.A., Bez, H.E.: Processed images in human perception: a case study in ultrasound breast imaging. Eur. J. Radiol. 73(3), 682–687 (2010)

    Article  Google Scholar 

  11. Jalalian, A., Mashohor, S.B., Mahmud, H.R., Saripan, M.I.B., Ramli, A.R.B., Karasfi, B.: Computer-aided detection/diagnosis of breast cancer in mammography and ultrasound: a review. Clin. Imaging 37(3), 420–426 (2013)

    Article  Google Scholar 

  12. Zhou, Y., Chen, H., Li, Y., Cao, X., Wang, S., Shen, D.: Cross-model attention-guided tumor segmentation for 3D automated breast ultrasound (ABUS) images. IEEE J. Biomed. Health Inform. 26(1), 301–311 (2021)

    Article  Google Scholar 

  13. Su, R., Zhang, D., Liu, J., Cheng, C.: Msu-net: Multi-scale u-net for 2D medical image segmentation. Front. Genet. 12, 639930 (2021)

    Article  Google Scholar 

  14. Zhou, Z., Rahman Siddiquee, M.M., Tajbakhsh, N., Liang, J.: Unet++: a nested U-net architecture for medical image segmentation. In: Stoyanov, D., et al. (eds.) DLMIA/ML-CDS -2018. LNCS, vol. 11045, pp. 3–11. Springer, Cham (2018). https://doi.org/10.1007/978-3-030-00889-5_1

    Chapter  Google Scholar 

  15. Li, M., Lian, F., Guo, S.: Multi-scale selection and multi-channel fusion model for pancreas segmentation using adversarial deep convolutional nets. J. Digit. Imaging 35, 47–55 (2022)

    Article  Google Scholar 

  16. Oktay, O., et al.: Attention U-net: learning where to look for the pancreas. arXiv preprint arXiv:180403999 (2018)

  17. Huang, H., et al. (eds.) Unet 3+: a full-scale connected unet for medical image segmentation. In: ICASSP 2020–2020 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP). IEEE (2020)

    Google Scholar 

  18. Liu, X., Guo, S., Yang, B., Ma, S., Zhang, H., Li, J., et al.: Automatic organ segmentation for CT scans based on super-pixel and convolutional neural networks. J. Digit. Imaging 31, 748–760 (2018)

    Article  Google Scholar 

  19. Pei, Y., Mu, L., Fu, Y., He, K., Li, H., Guo, S., et al.: Colorectal tumor segmentation of CT scans based on a convolutional neural network with an attention mechanism. IEEE Access. 8, 64131–64138 (2020)

    Article  Google Scholar 

  20. Ronneberger, O., Fischer, P., Brox, T.: U-net: convolutional networks for biomedical image segmentation. In: Navab, N., Hornegger, J., Wells, W.M., Frangi, A.F. (eds.) MICCAI 2015. LNCS, vol. 9351, pp. 234–241. Springer, Cham (2015). https://doi.org/10.1007/978-3-319-24574-4_28

    Chapter  Google Scholar 

  21. Goodfellow, I.J., et al.: Generative adversarial nets. In: Proceedings of the 27th International Conference on Neural Information Processing Systems, Montreal, Canada, vol. 2, pp. 2672–2680. MIT Press, Cambridge (2014)

    Google Scholar 

  22. Negi, A., Raj, A.N.J., Nersisson, R., Zhuang, Z., Murugappan, M.: RDA-UNET-WGAN: an accurate breast ultrasound lesion segmentation using Wasserstein generative adversarial networks. Arab. J. Sci. Eng. 45(8), 6399–6410 (2020)

    Article  Google Scholar 

  23. Huang, Q., Huang, Y., Luo, Y., Yuan, F., Li, X.: Segmentation of breast ultrasound image with semantic classification of superpixels. Med. Image Anal. 61, 101657 (2020)

    Article  Google Scholar 

  24. Zhang, Z., Liu, Q., Wang, Y.: Road extraction by deep residual u-net. IEEE Geosci. Remote Sens. Lett. 15(5), 749–753 (2018)

    Article  Google Scholar 

  25. Badrinarayanan, V., Kendall, A., Cipolla, R.: Segnet: a deep convolutional encoder-decoder architecture for image segmentation. IEEE Trans. Pattern Anal. Mach. Intell. 39(12), 2481–2495 (2017)

    Article  Google Scholar 

  26. Qin, X., Zhang, Z., Huang, C., Dehghan, M., Zaiane, O.R., Jagersand, M.: U2-Net: going deeper with nested U-structure for salient object detection. Pattern Recogn. 106, 107404 (2020)

    Article  Google Scholar 

Download references

Acknowledgment

This work was supported in part by The Key R&D Program of Guangdong Province, China (grant number 2021B0101420006), National Natural Science Foundation of China (grant number 62131015), and Science and Technology Commission of Shanghai Municipality (STCSM) (grant number 21010502600).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Dinggang Shen .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2023 The Author(s), under exclusive license to Springer Nature Switzerland AG

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Li, M. et al. (2023). Developing Large Pre-trained Model for Breast Tumor Segmentation from Ultrasound Images. In: Greenspan, H., et al. Medical Image Computing and Computer Assisted Intervention – MICCAI 2023. MICCAI 2023. Lecture Notes in Computer Science, vol 14226. Springer, Cham. https://doi.org/10.1007/978-3-031-43990-2_9

Download citation

  • DOI: https://doi.org/10.1007/978-3-031-43990-2_9

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-031-43989-6

  • Online ISBN: 978-3-031-43990-2

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics