Skip to main content

DisC-Diff: Disentangled Conditional Diffusion Model for Multi-contrast MRI Super-Resolution

  • Conference paper
  • First Online:
Medical Image Computing and Computer Assisted Intervention – MICCAI 2023 (MICCAI 2023)

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 14229))

Abstract

Multi-contrast magnetic resonance imaging (MRI) is the most common management tool used to characterize neurological disorders based on brain tissue contrasts. However, acquiring high-resolution MRI scans is time-consuming and infeasible under specific conditions. Hence, multi-contrast super-resolution methods have been developed to improve the quality of low-resolution contrasts by leveraging complementary information from multi-contrast MRI. Current deep learning-based super-resolution methods have limitations in estimating restoration uncertainty and avoiding mode collapse. Although the diffusion model has emerged as a promising approach for image enhancement, capturing complex interactions between multiple conditions introduced by multi-contrast MRI super-resolution remains a challenge for clinical applications. In this paper, we propose a disentangled conditional diffusion model, DisC-Diff, for multi-contrast brain MRI super-resolution. It utilizes the sampling-based generation and simple objective function of diffusion models to estimate uncertainty in restorations effectively and ensure a stable optimization process. Moreover, DisC-Diff leverages a disentangled multi-stream network to fully exploit complementary information from multi-contrast MRI, improving model interpretation under multiple conditions of multi-contrast inputs. We validated the effectiveness of DisC-Diff on two datasets: the IXI dataset, which contains 578 normal brains, and a clinical dataset with 316 pathological brains. Our experimental results demonstrate that DisC-Diff outperforms other state-of-the-art methods both quantitatively and visually.

Y. Mao and L. Jiang—Contribute equally in this work.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Subscribe and save

Springer+ Basic
$34.99 /Month
  • Get 10 units per month
  • Download Article/Chapter or eBook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Similar content being viewed by others

Notes

  1. 1.

    https://brain-development.org/ixi-dataset/.

  2. 2.

    https://bit.ly/3yethO4.

References

  1. Bhatia, K.K., Price, A.N., Shi, W., Hajnal, J.V., Rueckert, D.: Super-resolution reconstruction of cardiac MRI using coupled dictionary learning. In: 2014 IEEE 11th International Symposium on Biomedical Imaging (ISBI), pp. 947–950. IEEE (2014)

    Google Scholar 

  2. Charbonnier, P., Blanc-Feraud, L., Aubert, G., Barlaud, M.: Two deterministic half-quadratic regularization algorithms for computed imaging. In: Proceedings of 1st International Conference on Image Processing, vol. 2, pp. 168–172. IEEE (1994)

    Google Scholar 

  3. Chen, Y., Xie, Y., Zhou, Z., Shi, F., Christodoulou, A.G., Li, D.: Brain MRI super resolution using 3d deep densely connected neural networks. In: 2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018), pp. 739–742. IEEE (2018)

    Google Scholar 

  4. Dhariwal, P., Nichol, A.: Diffusion models beat GANs on image synthesis. In: Advances in Neural Information Processing Systems, vol. 34, pp. 8780–8794 (2021)

    Google Scholar 

  5. Feng, C.-M., Fu, H., Yuan, S., Xu, Y.: Multi-contrast MRI super-resolution via a multi-stage integration network. In: de Bruijne, M., et al. (eds.) MICCAI 2021. LNCS, vol. 12906, pp. 140–149. Springer, Cham (2021). https://doi.org/10.1007/978-3-030-87231-1_14

    Chapter  Google Scholar 

  6. Feng, C.-M., Yan, Y., Fu, H., Chen, L., Xu, Y.: Task transformer network for joint MRI reconstruction and super-resolution. In: de Bruijne, M., et al. (eds.) MICCAI 2021. LNCS, vol. 12906, pp. 307–317. Springer, Cham (2021). https://doi.org/10.1007/978-3-030-87231-1_30

    Chapter  Google Scholar 

  7. Hardie, R.: A fast image super-resolution algorithm using an adaptive wiener filter. IEEE Trans. Image Process. 16(12), 2953–2964 (2007)

    Article  MathSciNet  Google Scholar 

  8. Khaledyan, D., Amirany, A., Jafari, K., Moaiyeri, M.H., Khuzani, A.Z., Mashhadi, N.: Low-cost implementation of bilinear and bicubic image interpolation for real-time image super-resolution. In: 2020 IEEE Global Humanitarian Technology Conference (GHTC), pp. 1–5. IEEE (2020)

    Google Scholar 

  9. Lai, W.S., Huang, J.B., Ahuja, N., Yang, M.H.: Fast and accurate image super-resolution with deep Laplacian pyramid networks. IEEE Trans. Pattern Anal. Mach. Intell. 41(11), 2599–2613 (2018)

    Article  Google Scholar 

  10. Li, H., et al.: SRDiff: single image super-resolution with diffusion probabilistic models. Neurocomputing 479, 47–59 (2022)

    Article  Google Scholar 

  11. Liang, J., Cao, J., Sun, G., Zhang, K., Van Gool, L., Timofte, R.: SwinIR: image restoration using Swin transformer. In: Proceedings of the IEEE/CVF International Conference on Computer Vision, pp. 1833–1844 (2021)

    Google Scholar 

  12. Lim, B., Son, S., Kim, H., Nah, S., Mu Lee, K.: Enhanced deep residual networks for single image super-resolution. In: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition Workshops, pp. 136–144 (2017)

    Google Scholar 

  13. Liu, C., Wu, X., Yu, X., Tang, Y., Zhang, J., Zhou, J.: Fusing multi-scale information in convolution network for MR image super-resolution reconstruction. Biomed. Eng. Online 17(1), 1–23 (2018)

    Article  Google Scholar 

  14. Liu, P., Li, C., Schönlieb, C.-B.: GANReDL: medical image enhancement using a generative adversarial network with real-order derivative induced loss functions. In: Shen, D., et al. (eds.) MICCAI 2019. LNCS, vol. 11766, pp. 110–117. Springer, Cham (2019). https://doi.org/10.1007/978-3-030-32248-9_13

    Chapter  Google Scholar 

  15. Lu, C., Zhou, Y., Bao, F., Chen, J., Li, C., Zhu, J.: DPM-solver++: fast solver for guided sampling of diffusion probabilistic models. arXiv preprint: arXiv:2211.01095 (2022)

  16. Lu, L., Li, W., Tao, X., Lu, J., Jia, J.: MASA-SR: matching acceleration and spatial adaptation for reference-based image super-resolution. In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 6368–6377 (2021)

    Google Scholar 

  17. Lyu, Q., et al.: Multi-contrast super-resolution MRI through a progressive network. IEEE Trans. Med. Imaging 39(9), 2738–2749 (2020)

    Article  Google Scholar 

  18. Rombach, R., Blattmann, A., Lorenz, D., Esser, P., Ommer, B.: High-resolution image synthesis with latent diffusion models. In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 10684–10695 (2022)

    Google Scholar 

  19. Shi, F., Cheng, J., Wang, L., Yap, P.T., Shen, D.: LRTV: MR image super-resolution with low-rank and total variation regularizations. IEEE Trans. Med. Imaging 34(12), 2459–2466 (2015)

    Article  Google Scholar 

  20. Shi, J., Liu, Q., Wang, C., Zhang, Q., Ying, S., Xu, H.: Super-resolution reconstruction of MR image with a novel residual learning network algorithm. Phys. Med. Biol. 63(8), 085011 (2018)

    Article  Google Scholar 

  21. Stimpel, B., Syben, C., Schirrmacher, F., Hoelter, P., Dörfler, A., Maier, A.: Multi-modal super-resolution with deep guided filtering. In: Bildverarbeitung für die Medizin 2019. I, pp. 110–115. Springer, Wiesbaden (2019). https://doi.org/10.1007/978-3-658-25326-4_25

    Chapter  Google Scholar 

  22. Tsiligianni, E., Zerva, M., Marivani, I., Deligiannis, N., Kondi, L.: Interpretable deep learning for multimodal super-resolution of medical images. In: de Bruijne, M., et al. (eds.) MICCAI 2021. LNCS, vol. 12906, pp. 421–429. Springer, Cham (2021). https://doi.org/10.1007/978-3-030-87231-1_41

    Chapter  Google Scholar 

  23. Wang, J., Chen, Y., Wu, Y., Shi, J., Gee, J.: Enhanced generative adversarial network for 3D brain MRI super-resolution. In: Proceedings of the IEEE/CVF Winter Conference on Applications of Computer Vision, pp. 3627–3636 (2020)

    Google Scholar 

  24. Wei, Y., et al.: Multi-modal learning for predicting the genotype of glioma. IEEE Trans. Med. Imaging (2023)

    Google Scholar 

  25. Wei, Y., et al.: Structural connectome quantifies tumour invasion and predicts survival in glioblastoma patients. Brain 146, 1714–1727 (2022)

    Article  Google Scholar 

  26. Wei, Y., Li, C., Price, S.J.: Quantifying structural connectivity in brain tumor patients. In: de Bruijne, M., et al. (eds.) MICCAI 2021. LNCS, vol. 12907, pp. 519–529. Springer, Cham (2021). https://doi.org/10.1007/978-3-030-87234-2_49

    Chapter  Google Scholar 

  27. Zeng, K., Zheng, H., Cai, C., Yang, Y., Zhang, K., Chen, Z.: Simultaneous single-and multi-contrast super-resolution for brain MRI images based on a convolutional neural network. Comput. Biol. Med. 99, 133–141 (2018)

    Article  Google Scholar 

  28. Zhang, Y., Li, K., Li, K., Fu, Y.: MR image super-resolution with squeeze and excitation reasoning attention network. In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 13425–13434 (2021)

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Chao Li .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2023 The Author(s), under exclusive license to Springer Nature Switzerland AG

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Mao, Y., Jiang, L., Chen, X., Li, C. (2023). DisC-Diff: Disentangled Conditional Diffusion Model for Multi-contrast MRI Super-Resolution. In: Greenspan, H., et al. Medical Image Computing and Computer Assisted Intervention – MICCAI 2023. MICCAI 2023. Lecture Notes in Computer Science, vol 14229. Springer, Cham. https://doi.org/10.1007/978-3-031-43999-5_37

Download citation

  • DOI: https://doi.org/10.1007/978-3-031-43999-5_37

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-031-43998-8

  • Online ISBN: 978-3-031-43999-5

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics