Skip to main content

Leveraging Homomorphisms and Bitmaps to Enable the Mining of Embedded Patterns from Large Data Trees

  • Conference paper
  • First Online:
Database Systems for Advanced Applications (DASFAA 2015)

Part of the book series: Lecture Notes in Computer Science ((LNISA,volume 9049))

Included in the following conference series:

Abstract

Finding interesting tree patterns hidden in large datasets is an important research area that has many practical applications. Along the years, research has evolved from mining induced patterns to mining embedded patterns. Embedded patterns allow for discovering useful relationships which cannot be captured by induced patterns. Unfortunately, previous contributions have focused almost exclusively on mining patterns from a set of small trees. The problem of mining embedded patterns from large data trees has been neglected. This is mainly due to the complexity of this task related to the problem of unordered tree embedding test being NP-Complete. However, mining embedded patterns from large trees is important for many modern applications that arise naturally and in particular with the explosion of big data.

In this paper, we address the problem of mining unordered frequent embedded tree patterns from large trees. We propose a novel approach that exploits efficient homomorphic pattern matching algorithms to compute pattern support incrementally and avoids the costly enumeration of all pattern matchings required by previous approaches. A further originality of our approach is that matching information of already computed patterns is materialized as bitmaps. This technique not only minimizes the memory consumption but also reduces CPU costs by translating pattern evaluation to bitwise operations. An extensive experimental evaluation shows that our approach not only mines embedded patterns from real datasets up to several orders of magnitude faster than state-of-the-art tree mining algorithms applied to large data trees but also scales well empowering the extraction of patterns from large datasets where previous approaches fail.

The research of this author was supported by the National Natural Science Foundation of China under Grant No. 61202035 and 61272110.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Asai, T., Abe, K., Kawasoe, S., Arimura, H., Sakamoto, H., Arikawa, S.: Efficient substructure discovery from large semi-structured data. In: SDM (2002)

    Google Scholar 

  2. Asai, T., Arimura, H., Uno, T., Nakano, S.: Discovering frequent substructures in large unordered trees. In: Grieser, G., Tanaka, Y., Yamamoto, A. (eds.) DS 2003. LNCS (LNAI), vol. 2843, pp. 47–61. Springer, Heidelberg (2003)

    Chapter  Google Scholar 

  3. Bruno, N., Koudas, N., Srivastava, D.: Holistic twig joins: optimal XML pattern matching. In: SIGMOD (2002)

    Google Scholar 

  4. Chi, Y., Muntz, R.R., Nijssen, S., Kok, J.N.: Frequent subtree mining - an overview. Fundam. Inform. 66(1–2) (2005)

    Google Scholar 

  5. Chi, Y., Xia, Y., Yang, Y., Muntz, R.R.: Mining closed and maximal frequent subtrees from databases of labeled rooted trees. IEEE Trans. Knowl. Data Eng. 17(2) (2005)

    Google Scholar 

  6. Chi, Y., Yang, Y., Muntz, R.R.: Canonical forms for labelled trees and their applications in frequent subtree mining. Knowl. Inf. Syst. 8(2) (2005)

    Google Scholar 

  7. Dries, A., Nijssen, S.: Mining patterns in networks using homomorphism. In: SDM (2012)

    Google Scholar 

  8. Feng, Z., Hsu, W., Lee, M.-L.: Efficient pattern discovery for semistructured data. In: ICTAI (2005)

    Google Scholar 

  9. Goethals, B., Hoekx, E., den Bussche, J.V.: Mining tree queries in a graph. In: KDD (2005)

    Google Scholar 

  10. Han, J., Pei, J., Yin, Y.: Mining frequent patterns without candidate generation. In: SIGMOD Conference (2000)

    Google Scholar 

  11. Hido, S., Kawano, H.: Amiot: Induced ordered tree mining in tree-structured databases. In: ICDM (2005)

    Google Scholar 

  12. Kilpeläinen, P., Mannila, H.: Ordered and unordered tree inclusion. SIAM J. Comput. 24(2), 340–356 (1995)

    Article  MATH  MathSciNet  Google Scholar 

  13. Miklau, G., Suciu, D.: Containment and equivalence for a fragment of xpath. J. ACM 51(1), 2–45 (2004)

    Article  MathSciNet  Google Scholar 

  14. Mozafari, B., Zeng, K., D’Antoni, L., Zaniolo, C.: High-performance complex event processing over hierarchical data. ACM Trans. Database Syst. 38(4), 21 (2013)

    Article  MathSciNet  Google Scholar 

  15. Nijssen, S., Kok, J.N.: Efficient discovery of frequent unordered trees (2003)

    Google Scholar 

  16. Nijssen, S., Kok, J.N.: A quickstart in frequent structure mining can make a difference. In: KDD (2004)

    Google Scholar 

  17. Ogden, P., Thomas, D.B., Pietzuch, P.: Scalable XML query processing using parallel pushdown transducers. PVLDB 6(14), 1738–1749 (2013)

    Google Scholar 

  18. Tan, H., Hadzic, F., Dillon, T.S., Chang, E., Feng, L.: Tree model guided candidate generation for mining frequent subtrees from xml documents. TKDD 2(2) (2008)

    Google Scholar 

  19. Tatikonda, S., Parthasarathy, S., Kurç, T.M.: Trips and tides: new algorithms for tree mining. In: CIKM (2006)

    Google Scholar 

  20. Termier, A., Rousset, M.-C., Sebag, M.: Treefinder: a first step towards xml data mining. In ICDM (2002)

    Google Scholar 

  21. Termier, A., Rousset, M.-C., Sebag, M., Ohara, K., Washio, T., Motoda, H.: Dryadeparent, an efficient and robust closed attribute tree mining algorithm. IEEE Trans. Knowl. Data Eng. 20(3) (2008)

    Google Scholar 

  22. Wang, C., Hong, M., Pei, J., Zhou, H., Wang, W., Shi, B.-L.: Efficient pattern-growth methods for frequent tree pattern mining. In: Dai, H., Srikant, R., Zhang, C. (eds.) PAKDD 2004. LNCS (LNAI), vol. 3056, pp. 441–451. Springer, Heidelberg (2004)

    Chapter  Google Scholar 

  23. Wang, K., Liu, H.: Discovering structural association of semistructured data. IEEE Trans. Knowl. Data Eng. 12(3) (2000)

    Google Scholar 

  24. Wu, X., Souldatos, S., Theodoratos, D., Dalamagas, T., Vassiliou, Y., Sellis, T.K.: Processing and evaluating partial tree pattern queries on xml data. IEEE Trans. Knowl. Data Eng. 24(12), 2244–2259 (2012)

    Article  Google Scholar 

  25. Wu, X., Theodoratos, D., Kementsietsidis, A.: Configuring bitmap materialized views for optimizing xml queries. World Wide Web, pp. 1–26 (2014)

    Google Scholar 

  26. Wu, X., Theodoratos, D., Wang, W.H.: Answering XML queries using materialized views revisited. In: CIKM (2009)

    Google Scholar 

  27. Wu, X., Theodoratos, D., Wang, W.H., Sellis, T.: Optimizing XML queries: Bitmapped materialized views vs. indexes. Inf. Syst. 38(6), 863–884 (2013)

    Article  Google Scholar 

  28. Xiao, Y., Yao, J.-F., Li, Z., Dunham, M.H.: Efficient data mining for maximal frequent subtrees. In: ICDM (2003)

    Google Scholar 

  29. Zaki, M.J.: Efficiently mining frequent embedded unordered trees. Fundam. Inform. 66(1–2) (2005)

    Google Scholar 

  30. Zaki, M.J.: Efficiently mining frequent trees in a forest: Algorithms and applications. IEEE Trans. Knowl. Data Eng. 17(8) (2005)

    Google Scholar 

  31. Zaki, M.J., Hsiao. C.-J.: Efficient algorithms for mining closed itemsets and their lattice structure. IEEE Trans. Knowl. Data Eng. 17(4) (2005)

    Google Scholar 

  32. Zhu, F., Qu, Q., Lo, D., Yan, X., Han, J., Yu, P.S.: Mining top-k large structural patterns in a massive network. PVLDB 4(11) (2011)

    Google Scholar 

  33. Zou, L., Lu, Y.S., Zhang, H., Hu, R.: PrefixTreeESpan: a pattern growth algorithm for mining embedded subtrees. In: WISE (2006)

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Xiaoying Wu .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2015 Springer International Publishing Switzerland

About this paper

Cite this paper

Wu, X., Theodoratos, D. (2015). Leveraging Homomorphisms and Bitmaps to Enable the Mining of Embedded Patterns from Large Data Trees. In: Renz, M., Shahabi, C., Zhou, X., Cheema, M. (eds) Database Systems for Advanced Applications. DASFAA 2015. Lecture Notes in Computer Science(), vol 9049. Springer, Cham. https://doi.org/10.1007/978-3-319-18120-2_1

Download citation

  • DOI: https://doi.org/10.1007/978-3-319-18120-2_1

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-18119-6

  • Online ISBN: 978-3-319-18120-2

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics