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FCM-Based Method for MRI Segmentation of Anatomical Structure

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Bioinformatics and Biomedical Engineering (IWBBIO 2016)

Part of the book series: Lecture Notes in Computer Science ((LNBI,volume 9656))

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Abstract

Fuzzy C-means (FCM) has been widely applied to segmentation of medical images, especially MRI images for identifying living organs and supporting medical diagnosis. However, in practice, this method is too sensitive to image noises. Then, many methods have been proposed to improve the objective function of FCM by adding a penalty term to it. One drawback of these methods is that they can determine neither the appropriate size of observation window for each pixel of interest for incorporating spatial information, nor the suitable importance coefficient of the penalty term. Moreover, the modification of the objective function of FCM often causes additional complex derivations. In this paper, we develop a new FCM-based method for medical MRI image segmentation. This method permits to dynamically determine the optimal size of observation window for each pixel of interest without adding any penalty term. Moreover, a n-dimensional feature vector including both local and global spatial information between neighboring pixels is generated to describe each pixel in the objective function. And specialized a priori knowledge is integrated into the segmentation procedure in order to control the application of FCM for tissue classification of thigh. The effectiveness and the robustness of the proposed method have been validated by real MRI image of thigh.

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References

  1. Seidell, J.C., Bakker, C.J.C., Van der Kooy, K.: Imaging techniques for measuring adipose-tissue distribution-a comparison between computed tomography and 1.5-T magnetic resonance. Am. J. Clin. Nutr. 51, 953–957 (1990)

    Google Scholar 

  2. Schaefer, G., Hassanien, A., Jiang, J.: Computational Intelligence in Medical Imaging. CRC Press, Taylor & Francis group, London (2009)

    Book  Google Scholar 

  3. Imamoglu, N., Gomez-Tames, J., Siyu, H., Dong-Yun, G., Kita, K., Wenwei, Y.: Unsupervised muscle region extraction by fuzzy decision based saliency feature integration on thigh MRI for 3D modeling. In: IEEE International Conference on Machine Vision Applications, IAPR, Japan, pp. 150–153 (2015)

    Google Scholar 

  4. Barra, V., Boire, J.V.: Segmentation of fat and muscle from MR images of the thigh by a possibilistic clustering algorithm. Comput. Methods Programs Biomed. 68, 185–193 (2002)

    Article  Google Scholar 

  5. Liew, A.W., Yan, H.: An adaptive spatial fuzzy clustering algorithm for 3-D MR image segmentation. IEEE Trans. Med. Imaging 22(9), 1063–1075 (2003)

    Article  Google Scholar 

  6. Zhang, D., Chen, S.: A novel kernelized fuzzy C-means algorithm with application in medical image segmentation. Artif. Intell. Med. 32, 37–50 (2004)

    Article  Google Scholar 

  7. Adhikaria, S.K., Sing, J.K., Basu, D.K., Nasipuri, M.: Conditional spatial fuzzy C-means clustering algorithm for segmentation of MRI images. Appl. Soft Comput. 34, 758–769 (2015)

    Article  Google Scholar 

  8. Chen, S., Zhang, D.: Robust image segmentation using FCM with spatial constraints based on new kernel-induced distance measure. IEEE Trans. Syst. Man Cybern. B Cybern. 34(4), 1907–1916 (2004)

    Article  Google Scholar 

  9. Ahmed, M.N., Yamany, S.M., Mohamed, N., Farag, A.A., Moriarty, T.: A modified fuzzy C-means algorithm for bias field estimation and segmentation of MRI data. IEEE Trans. Med. Imaging 21(3), 193–199 (2002)

    Article  Google Scholar 

  10. Pham, D.L., Prince, J.L.: An adaptive fuzzy C-means algorithm for image segmentation in the presence of intensity inhomogeneity. Pattern Recogn. Lett. 20, 57–68 (1999)

    Article  MATH  Google Scholar 

  11. Chen, J.H., Chen, C.S.: Fuzzy kernel perceptron. IEEE Trans. Neural Netw. 13, 1364–1373 (2002)

    Article  Google Scholar 

  12. Ahmed, M.N., Yamany, S.M., Mohamed, N., Farag, A.A., Moriarty, T.: A modified fuzzy C-means algorithm for bias field estimation and segmentation of MRI data. IEEE Trans. Med. Imaging 21, 193–199 (2002)

    Article  Google Scholar 

  13. Tolias, Y.A., Panas, S.M.: Image segmentation by a fuzzy clustering algorithm using adaptive spatially constrained membership functions. IEEE Trans. Syst. Man Cybern. A 28, 359–369 (1998)

    Article  Google Scholar 

  14. Tolias, Y.A., Panas, S.M.: On applying spatial constraints in fuzzy image clustering using a fuzzy rule-based system. IEEE Sig. Process. Lett. 5, 245–247 (1998)

    Article  Google Scholar 

  15. Douglas, T.S., Solomonidis, S.E., Lee, V.S.P., Spence, W.D., Sandham, W.A., Hadley, D.M.: Automatic segmentation of magnetic resonance images of the trans-femoral residual limb. Med. Eng. Phys. 20, 756–763 (1998)

    Article  Google Scholar 

  16. Kang, H.: Contribution to automatic corporal tissue classification by integrating qualitative medical knowledge: application to the analysis of musculo skeletal diseases and disabilities from MRI sequences. Ph.D thesis, Universite de Valenciennes et du Hainaut-Cambresis, France (2009)

    Google Scholar 

  17. Muller, K.R., Mika, S., Ratsch, G., Tsuda, K., Scholkopf, B.: An introduction to kernel-based learning algorithms. IEEE Trans. Neural Netw. 12(2), 181–201 (2001)

    Article  Google Scholar 

  18. Girolami, M.: Mercer kernel-based clustering in feature space. IEEE Trans. Neural Netw. 13, 780–784 (2002)

    Article  Google Scholar 

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Correspondence to Pinti Antonio .

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Antonio, P. (2016). FCM-Based Method for MRI Segmentation of Anatomical Structure. In: Ortuño, F., Rojas, I. (eds) Bioinformatics and Biomedical Engineering. IWBBIO 2016. Lecture Notes in Computer Science(), vol 9656. Springer, Cham. https://doi.org/10.1007/978-3-319-31744-1_16

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  • DOI: https://doi.org/10.1007/978-3-319-31744-1_16

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-31743-4

  • Online ISBN: 978-3-319-31744-1

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