Skip to main content

Hardware Architecture Benchmarking for Simulation of Human Immune System by Multi-agent Systems

  • Conference paper
  • First Online:
Multi-Agent Systems and Agreement Technologies (EUMAS 2015, AT 2015)

Abstract

The emergence of agent oriented systems has provided an alternative approach to address many complex problems that require distributed behavior, local decisions, and emerging global behavior from the interactions of their basic elements. There are several natural, artificial and social phenomena that present these features. However, despite providing a suitable tool for modeling complex distributed systems, implementations of multi-agent systems are limited by the available hardware architecture. A recent possibility to circumvent this problem is the use of graphics cards to implement such systems. Nevertheless, these devices reach the optimal performance when agents have homogeneous and simple behavior, which might not be the case of many problems. Systems such as simulators of the immune system, in addition to having a large number of agents with complex behavior, those agents communicate massively, indirectly, through dissemination of various substances in their environment. Diffusion of substances is something easily simulated in modern current graphics cards, but the problem is to provide the results of those simulations to thousands (or millions) of agents simultaneously. This paper presents a benchmarking conducted to determine a suitable software/hardware architecture to implement such a system. The results show that a heterogeneous system can have a better performance.

A. de Paiva Oliveira—The author receives grant from capes, process n.0449/15-6.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Shoham, Y.: Agent-oriented programming. Artif. Intell. 60(1), 51–92 (1993)

    Article  MathSciNet  Google Scholar 

  2. Chen, W., Ward, K., Li, Q., Kecman, V., Najarian, K., Menke, N.: Agent based modeling of blood coagulation system: implementation using a gpu based high speed framework. In: 2011 Annual International Conference of the IEEE on Engineering in Medicine and Biology Society, EMBC, pp. 145–148. IEEE (2011)

    Google Scholar 

  3. Richmond, P., Walker, D., Coakley, S., Romano, D.: High performance cellular level agent-based simulation with flame for the gpu. Briefings Bioinform. 11(3), 334–347 (2010)

    Article  Google Scholar 

  4. Dewri, R., Chakraborti, N.: Simulating recrystallization through cellular automata and genetic algorithms. Modell. Simul. Mater. Sci. Eng. 13(2), 173 (2005)

    Article  Google Scholar 

  5. North, M.J., Collier, N.T., Ozik, J., Tatara, E.R., Macal, C.M., Bragen, M., Sydelko, P.: Complex adaptive systems modeling with repast simphony. Complex adapt. syst. model. 1(1), 1–26 (2013)

    Article  Google Scholar 

  6. Kiran, M., Richmond, P., Holcombe, M., Chin, L.S., Worth, D., Greenough, C.: Flame: simulating large populations of agents on parallel hardware architectures. In: Proceedings of the 9th International Conference on Autonomous Agents and Multiagent Systems, vol. 1, pp. 1633–1636. International Foundation for Autonomous Agents and Multiagent Systems (2010)

    Google Scholar 

Download references

Acknowledgments

This research is supported in part by the funding agencies FAPEMIG, CNPq, and CAPES.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Alcione de Paiva Oliveira .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2016 Springer International Publishing Switzerland

About this paper

Cite this paper

Martins, F.R., de Paiva Oliveira, A., Ferreira, R.S., Cerqueira, F.R. (2016). Hardware Architecture Benchmarking for Simulation of Human Immune System by Multi-agent Systems. In: Rovatsos, M., Vouros, G., Julian, V. (eds) Multi-Agent Systems and Agreement Technologies. EUMAS AT 2015 2015. Lecture Notes in Computer Science(), vol 9571. Springer, Cham. https://doi.org/10.1007/978-3-319-33509-4_34

Download citation

  • DOI: https://doi.org/10.1007/978-3-319-33509-4_34

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-33508-7

  • Online ISBN: 978-3-319-33509-4

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics