Skip to main content

Integrating QuickBundles into a Model-Guided Approach for Extracting “Anatomically-Coherent” and “Symmetry-Aware” White Matter Fiber-Bundles

  • Chapter
  • First Online:
Multidisciplinary Approaches to Neural Computing

Abstract

This paper presents a novel approach aiming at improving the White Matter (WM) fiber-bundle extraction approach described in (Stamile C et al Brain Informatics and Health: 8th International Conference, BIH, 2015). This provides anatomically coherent fiber-bundles, but it is unable to distinguish symmetric fiber-bundles. The new approach we are proposing here overcomes this limitation by integrating QuickBundles (QB) into it. As a matter of fact, QB has features complementary to those of the approach of (Stamile C et al Brain Informatics and Health: 8th International Conference, BIH, 2015), because it is capable of distinguishing symmetric fiber-bundles but, often, it does not return anatomically coherent fiber-bundles. We also present some experiments showing that the Precision, the Recall and the F-Measure of this new approach improve by 9.76, 3.08 and 8.96%, compared to the corresponding ones of the approach of (Stamile C et al Brain Informatics and Health: 8th International Conference, BIH, 2015), which, in their turn, were shown to be better than the ones of QB.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Caruyer, E., Daducci, A., Descoteaux, M., Houde, J.-C., Thiran, J.: Phantomas: a flexible software library to simulate diffusion mr phantom. In: ISMRM (2014)

    Google Scholar 

  2. Catani, M., Thiebaut de Schotten, M.: A diffusion tensor imaging tractography atlas for virtual in vivo dissections. Cortex 44(8), 1105–1132 (2008)

    Google Scholar 

  3. Do, H., Melnik, S., Rahm, E.: Comparison of Schema Matching Evaluations. In: Proceedings of Web, Web-Services, and Database Systems, pp. 221–237. LNCS (2002)

    Google Scholar 

  4. Garyfallidis, E., Brett, M., Correia, M.M., Williams, G.B., Nimmo-Smith, I.: Quickbundles, a method for tractography simplification. Front. Neurosci. 6, 175 (2012)

    Google Scholar 

  5. Mårtensson, J., Nilsson, M., Ståhlberg, F., Sundgren, P.C., Nilsson, C., van Westen, D., Larsson, E.-M., Lätt, J.: Spatial analysis of diffusion tensor tractography statistics along the inferior fronto-occipital fasciculus with application in progressive supranuclear palsy. MAGMA 26(6), 527–537 (2013)

    Google Scholar 

  6. Stamile, C., Cauteruccio, F., Terracina, G., Ursino, D., Kocevar, G., Sappey-Marinier, D.: A model-guided string-based approach to white matter fiber-bundles extraction. In: Brain Informatics and Health: 8th International Conference, BIH, pp. 135–144. LNCS (2015)

    Google Scholar 

  7. Yeatman, J.D., Dougherty, R.F., Myall, N.J., Wandell, B.A., Feldman, H.M.: Tract profiles of white matter properties: automating fiber-tract quantification. PLoS One 7(11), e49790 (2012)

    Article  Google Scholar 

  8. Zhang, S., Correia, S., Laidlaw, D.H.: Identifying white-matter fiber bundles in dti data using an automated proximity-based fiber-clustering method. IEEE Trans. Vis. Comput. Graph. 14(5), 1044–1053 (2008)

    Article  Google Scholar 

Download references

Acknowledgements

This research was supported by EU MC ITN TRANSACT 2012 #316679. This work was partially supported by Aubay Italia S.p.A.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Francesco Cauteruccio .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2018 Springer International Publishing AG

About this chapter

Cite this chapter

Cauteruccio, F., Stamile, C., Terracina, G., Ursino, D., Sappey-Marinier, D. (2018). Integrating QuickBundles into a Model-Guided Approach for Extracting “Anatomically-Coherent” and “Symmetry-Aware” White Matter Fiber-Bundles. In: Esposito, A., Faudez-Zanuy, M., Morabito, F., Pasero, E. (eds) Multidisciplinary Approaches to Neural Computing. Smart Innovation, Systems and Technologies, vol 69. Springer, Cham. https://doi.org/10.1007/978-3-319-56904-8_4

Download citation

  • DOI: https://doi.org/10.1007/978-3-319-56904-8_4

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-56903-1

  • Online ISBN: 978-3-319-56904-8

  • eBook Packages: EngineeringEngineering (R0)

Publish with us

Policies and ethics