Abstract
For data with non-Euclidean geometric structure, hypothesis testing is challenging because most statistical tools, for example principal component analysis (PCA), are specific for linear data with a Euclidean structure. In the last 15 years, the subject has advanced through the emerging development of central limit theorems, first for generalizations of means, then also for geodesics and more generally for lower dimensional subspaces. Notably, there are data spaces, even geometrically very benign, such as the torus, where this approach is statistically not feasible, unless the geometry is changed, to that of a sphere, say. This geometry is statistically so benign that nestedness of Euclidean PCA, which is usually not given for the above general approaches, is also naturally given through principal nested great spheres (PNGS) and even more flexible than Euclidean PCA through principal nested (small) spheres (PNS). In this contribution we illustrate applications of bootstrap two-sample tests for the torus and its higher dimensional generalizations, polyspheres.
Acknowledging the Niedersachsen Vorab of the Volkswagen Foundation.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Eltzner, B., Jung, S., Huckemann, S.: Dimension reduction on polyspheres with application to skeletal representations. In: Nielsen, F., Barbaresco, F. (eds.) GSI 2015. LNCS, vol. 9389, pp. 22–29. Springer, Cham (2015). doi:10.1007/978-3-319-25040-3_3
Eltzner, B., Huckemann, S.F., Mardia, K.V.: Deformed torus PCA with applications to RNA structure (2015). arXiv:1511.04993
Frellsen, J., Moltke, I., Thiim, M., Mardia, K.V., Ferkinghoff-Borg, J., Hamelryck, T.: A probabilistic model of RNA conformational space. PLoS Comput. Biol. 5(6), e1000406 (2009)
Huckemann, S., Hotz, T., Munk, A.: Intrinsic shape analysis: Geodesic principal component analysis for Riemannian manifolds modulo Lie group actions (with discussion). Stat. Sin. 20(1), 1–100 (2010)
Huckemann, S., Ziezold, H.: Principal component analysis for Riemannian manifolds with an application to triangular shape spaces. Adv. Appl. Probab. (SGSA) 38(2), 299–319 (2006)
Huckemann, S.F., Eltzner, B.: Polysphere PCA with applications. In: Proceedings of the 33th LASR Workshop, pp. 51–55. Leeds University Press (2015). http://www1.maths.leeds.ac.uk/statistics/workshop/lasr2015/Proceedings15.pdf
Huckemann, S.F., Eltzner, B.: Backward nested descriptors asymptotics with inference on stem cell differentiation (2017). arXiv:1609.00814
Jung, S., Dryden, I., Marron, J.: Analysis of principal nested spheres. Submitted to Biometrika (2010)
Schulz, J., Jung, S., Huckemann, S., Pierrynowski, M., Marron, J., Pizer, S.M.: Analysis of rotational deformations from directional data. J. Comput. Graph. Stat. 24(2), 539–560 (2015)
Siddiqi, K., Pizer, S.: Medial Representations: Mathematics, Algorithms and Applications. Springer, Heidelberg (2008)
Sommer, S.: Horizontal dimensionality reduction and iterated frame bundle development. In: Nielsen, F., Barbaresco, F. (eds.) GSI 2013. LNCS, vol. 8085, pp. 76–83. Springer, Heidelberg (2013). doi:10.1007/978-3-642-40020-9_7
Wadley, L.M., Keating, K.S., Duarte, C.M., Pyle, A.M.: Evaluating and learning from RNA pseudotorsional space Quantitative validation of a reduced representation for RNAstructure. J. Mol. Biol. 372(4), 942–957 (2007). http://www.sciencedirect.com/science/article/pii/S0022283607008509
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2017 Springer International Publishing AG
About this paper
Cite this paper
Eltzner, B., Huckemann, S. (2017). Applying Backward Nested Subspace Inference to Tori and Polyspheres. In: Nielsen, F., Barbaresco, F. (eds) Geometric Science of Information. GSI 2017. Lecture Notes in Computer Science(), vol 10589. Springer, Cham. https://doi.org/10.1007/978-3-319-68445-1_68
Download citation
DOI: https://doi.org/10.1007/978-3-319-68445-1_68
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-319-68444-4
Online ISBN: 978-3-319-68445-1
eBook Packages: Computer ScienceComputer Science (R0)