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Mean Field Analysis for Continuous Time Bayesian Networks

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New Frontiers in Quantitative Methods in Informatics (InfQ 2017)

Part of the book series: Communications in Computer and Information Science ((CCIS,volume 825))

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Abstract

In this paper we investigate the use of the mean field technique to analyze Continuous Time Bayesian Networks (CTBN). They model continuous time evolving variables with exponentially distributed transitions with the values of the rates dependent on the parent variables in the graph. CTBN inference consists of computing the probability distribution of a subset of variables, conditioned by the observation of other variables’ values (evidence). The computation of exact results is often unfeasible due to the complexity of the model. For such reason, the possibility to perform the CTBN inference through the equivalent Generalized Stochastic Petri Net (GSPN) was investigated in the past. In this paper instead, we explore the use of mean field approximation and apply it to a well-known epidemic case study. The CTBN model is converted in both a GSPN and in a mean field based model. The example is then analyzed with both solutions, in order to evaluate the accuracy of the mean field approximation for the computation of the posterior probability of the CTBN given an evidence. A summary of the lessons learned during this preliminary attempt concludes the paper.

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Notes

  1. 1.

    To improve readability in Fig. 4 the subscripts that specify the position in the torus graph of the places and transitions are omitted.

References

  1. Ajmone-Marsan, M., Balbo, G., Conte, G., Donatelli, S., Franceschinis, G.: Modelling With Generalized Stochastic Petri Nets. Wiley, New York (1994)

    MATH  Google Scholar 

  2. Benaim, M., Le Boudec, J.Y.: A class of mean field interaction models for computer and communication systems. Perform. Eval. 65(11), 823–838 (2008)

    Article  Google Scholar 

  3. Bobbio, A., Cerotti, D., Gribaudo, M., Iacono, M., Manini, D.: Markovian agent models: a dynamic population of interdependent Markovian agents. In: Al-Begain, K., Bargiela, A. (eds.) Seminal Contributions to Modelling and Simulation. SFMA, pp. 185–203. Springer, Cham (2016). https://doi.org/10.1007/978-3-319-33786-9_13

    Chapter  Google Scholar 

  4. Bobbio, A., Gribaudo, M., Telek, M.: Analysis of large scale interacting systems by mean field method. In: 5th International Conference on the Quantitative Evaluation of SysTems (QEST2008) (2008)

    Google Scholar 

  5. Bortolussi, L., Hillston, J., Latella, D., Massink, M.: Continuous approximation of collective system behaviour: a tutorial. Perform. Eval. 70(5), 317–349 (2013)

    Article  Google Scholar 

  6. Boudec, J.Y.L., McDonald, D., Mundinger, J.: A generic mean field convergence result for systems of interacting objects. In: International Conference on the Quantitative Evaluation of Systems, pp. 3–18, September 2007

    Google Scholar 

  7. Boyen, X., Koller, D.: Tractable inference for complex stochastic processes. In: Conference on Uncertainty in Artificial Intelligence, pp. 33–42 (1998)

    Google Scholar 

  8. Cho, J.W., Le Boudec, J.Y., Jang, Y.: On the validity of the fixed point equation and decoupling assumption for analyzing the 802.11 MAC protocol. Perform. Eval. Rev. 38(2), 36–38 (2010)

    Article  Google Scholar 

  9. Codetta-Raiteri, D., Portinale, L.: A Petri net-based tool for the analysis of generalized continuous time Bayesian networks. In: Theory and Application of Multi-Formalism Modeling, pp. 118–143. IGI Global (2013)

    Google Scholar 

  10. El-Hay, T., Friedman, N., Kupferman, R.: Gibbs sampling in factorized continuous time Markov processes. In: Conference on Uncertainty in Artificial Intelligence (2008)

    Google Scholar 

  11. Fan, Y., Shelton, C.: Sampling for approximate inference in continuous time Bayesian networks. In: International Symposium on AI and Mathematics (2008)

    Google Scholar 

  12. Gopalratnam, K., Kautz, H., Weld, D.S.: Extending continuous time Bayesian networks. In: Proceedings of AAAI 2005, pp. 981–986, Pittsburgh, PA (2005)

    Google Scholar 

  13. Lauritzen, S.L., Richardson, T.S.: Chain graph models and their causal interpretations. J. Roy. Stat. Soc. B 64(3), 321–348 (2002)

    Article  MathSciNet  Google Scholar 

  14. Murphy, K.: Dynamic Bayesian Networks: Representation, Inference and Learning. Ph.D Thesis, UC Berkley (2002)

    Google Scholar 

  15. Nodelman, U., Koller, D., Shelton, C.R.: Expectation propagation for continuous time Bayesian networks. Computing Research Repository, abs/1207.1401 (2012)

    Google Scholar 

  16. Nodelman, U., Shelton, C.R., Koller, D.: Continuous time Bayesian networks. In: Conference on Uncertainty in Artificial Intelligence, pp. 378–387 (2002)

    Google Scholar 

  17. Nodelman, U., Shelton, C.R., Koller, D.: Expectation propagation for continuous time Bayesian networks. In: Conference on Uncertainty in Artificial Intelligence, pp. 431–440 (2005)

    Google Scholar 

  18. Opper, M., Saad, D., (eds.) Advanced Mean Field Methods: Theory and Practice, p. 10. MIT press, Cambridge (2002)

    Google Scholar 

  19. Portinale, L., Bobbio, A., Codetta-Raiteri, D., Montani, S.: Compiling dynamic fault trees into dynamic Bayesian nets for reliability analysis: the Radyban tool. In: Bayesian Modeling Applications Workshop, CEUR Workshop Proceedings, vol. 268, Vancouver, Canada, July 2007

    Google Scholar 

  20. Saria, S., Nodelman, U., Koller, D.: Reasoning at the right time granularity. In: Conference on Uncertainty in Artificial Intelligence, pp. 421–430 (2007)

    Google Scholar 

  21. Sznitman, A.-S.: Topics in propagation of chaos. In: Hennequin, P.-L. (ed.) Ecole d’Eté de Probabilités de Saint-Flour XIX — 1989. LNM, vol. 1464, pp. 165–251. Springer, Heidelberg (1991). https://doi.org/10.1007/BFb0085169

    Chapter  Google Scholar 

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Acknowledgments

This work is original and has a financial support of the Università del Piemonte Orientale.

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Correspondence to Davide Cerotti .

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Cerotti, D., Codetta-Raiteri, D. (2018). Mean Field Analysis for Continuous Time Bayesian Networks. In: Balsamo, S., Marin, A., Vicario, E. (eds) New Frontiers in Quantitative Methods in Informatics. InfQ 2017. Communications in Computer and Information Science, vol 825. Springer, Cham. https://doi.org/10.1007/978-3-319-91632-3_12

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  • DOI: https://doi.org/10.1007/978-3-319-91632-3_12

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