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The Application of Grid Computing to Real-Time Functional MRI Analysis

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Parallel and Distributed Processing and Applications (ISPA 2004)

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 3358))

Abstract

The analysis of brain imaging data such as functional MRI (fMRI) data often requires considerable computing resources, which in most cases are not readily available in many medical imaging facilities. This lack of computing power makes it difficult for researchers and medical practitioners alike to perform on-site analysis of the generated data. This paper proposes and demonstrates the use of Grid computing technology to provide medical imaging facilities with the capability of analyzing functional MRI data in real time with results available within seconds after data acquisition. Using PC clusters as analysis servers, and a software package that includes fMRI analysis tools, data transfer routines, and an easy-to-use graphical user interface, we are able to achieve fully real-time performance with a total processing time of 1.089 s per image volume (64 x 64 x 30 in size), much less than the per volume acquisition time set to 3.0 s. We also study the feasibility of using XML-based computational web services, and show how such web services can improve accessibility and interoperability while still making real-time analysis possible.

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References

  1. Sarmenta, L.F.G., Chua, S.J., Echevarria, P., Mendoza, J.M., Santos, R.R., Tan, S.: Bayanihan Computing .NET: Grid Computing with XML Web Services. In: 2nd IEEE International Symposium on Cluster Computing and the Grid, 2002, Berlin, Germany (2002)

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  2. Bagarinao, E., Matsuo, K., Nakai, T., Sato, S.: Estimation of general linear model coefficients for real-time application. Neuroimage 19(2), 422–429 (2003)

    Article  Google Scholar 

  3. Foster, I., et al.: The Physiology of the Grid: An Open Grid Services Architecture for Distributed Systems Integration (February 2002), http://www.globus.org/research/papers/ogsa.pdf

  4. Montagnat, J., Breton, V., Magnin, I.E.: Using grid technologies to face medical image analysis challenges. In: BioGrid 2003, IEEE/ACM CCGrid 2003, Tokyo, Japan (May 2003)

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  5. Tweed, T., Miguet, S.: Distributed indexation of a mammographic database using the grid. In: International Workshop on Grid Computing and e-Science. 17th Annual ACM International Conference on Supercomputing, San Francisco, USA, June 21 (2003)

    Google Scholar 

  6. Buyya, R., Date, S., Mizuno-Matsumoto, Y., Venugopal, S., Abramson, D.: Composition of Distributed Brain Activity Analysis and its On-Demand Deployment on Global Grids. Technical Report, Grid Computing and Distributed Systems (GRIDS) Lab, Dept. of Computer Science and Software Engineering, The University of Melbourne, Australia (2002)

    Google Scholar 

  7. The fMRI Data Center Home Page, http://www.fmridc.org/

  8. GridSphere Home Page, http://www.gridsphere.org/

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© 2004 Springer-Verlag Berlin Heidelberg

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Bagarinao, E., Sarmenta, L., Tanaka, Y., Matsuo, K., Nakai, T. (2004). The Application of Grid Computing to Real-Time Functional MRI Analysis. In: Cao, J., Yang, L.T., Guo, M., Lau, F. (eds) Parallel and Distributed Processing and Applications. ISPA 2004. Lecture Notes in Computer Science, vol 3358. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-30566-8_36

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  • DOI: https://doi.org/10.1007/978-3-540-30566-8_36

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-24128-7

  • Online ISBN: 978-3-540-30566-8

  • eBook Packages: Computer ScienceComputer Science (R0)

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