Abstract
A novel approach to segment cardiac magnetic resonance (CMR) images is presented in order to overcome some challenges such as problems with papillary muscles and the non homogeneities of the cavity due to blood flow. It consists in filtering short axis CMR images, using connected operators (area-open and area-close filters) to homogenize the cavity, prior to the segmentation which is performed using GVF-Snake algorithm in two steps. Validation was performed on thirty-nine slices by comparing resulting segmentation to the manual contours traced by an expert. This comparison showed good results with an overall average similarity area of 90.7% and an average distance between the two contours of 0.6 pixel.
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References
Gerber, BL., Garot, J., Bluemke, DA, Wu, KC., Lima, JA.: Accuracy of contrast-enhanced magnetic resonance imaging in predicting improvement of regional myocardial function in patients after acute myocardial infarction. Circulation 106, 1083–1089 (2002)
Beek, A., Kuhl, H., Bondarenko, O., Twisk, J., Hofman, M., van Dockum, W., Visser, C., van Rossum, A.: Delayed contrast-enhanced magnetic resonance imaging for the prediction of regional functional improvement after acute myocardial infarction. J. Am. Coll Cardiol. 42, 902–904 (2003)
Hsu, L., Natanzon, A., Kellman, P., Hirsch, G., Aletras, A., Arai, A.: Quantitative myocardial infarction on delayed enhancement MRI. Part I: Animal validation of an automated feature analysis and combined thresholding infarct sizing algorithm. J. Magn. Reson. Imaging 23, 298–308 (2006)
El Berbari, R., Kachenoura, N., Redheuil, A., Bloch, I., Mousseaux, E., Frouin, F.: Using cine MR images to evaluate myocardial infarct transmurality on delayed enhancement images. IEEE International Symposium on Biomedical Imaging: From Nano to Macro pp. 145–148 (2006)
Noble, NMI., Hill, DLG., Breeuwer, M., Schnabel, J., Hawkes, D., Gerritsen, FA., Razavi, R.: Myocardial delineation via registration in a polar coordinate system. In: Dohi, T., Kikinis, R. (eds.) MICCAI 2002. LNCS, vol. 2488, pp. 651–658. Springer, Heidelberg (2002)
Lynch, M., Ghita, O., Whelam, P.: Automatic segmentation of the left ventricle cavity and myocardium in MRI data. Comput. Biol. Med. 36, 389–407 (2006)
Kauss, M., Berg, JV., Niessen, W., Pekar, V.: Automated segmentation of the left ventricle in cardiac MRI. In: Ellis, R.E., Peters, T.M. (eds.) MICCAI 2003. LNCS, vol. 2878, pp. 432–439. Springer, Heidelberg (2003)
Kass, M., Witkin, A., Terzopoulos, D.: Snakes: Active contour models. Int. J. Comput. Vis. 1, 321–331 (1988)
Cohen, LD.: On active contours models and balloons. CVGIP Image Understanding 53, 211–221 (1991)
Xu, C., Prince, J.: Snakes, Shapes, and Gradient Vector Flow. IEEE Trans. Med. Imag. 7, 359–369 (1998)
Pluempitiwiriyawej, C., Moura, J., Fellow, W.Y., Ho, C.: STACS: new active contour scheme for cardiac MR image segmentation. IEEE Trans. Med. Imag. 24, 593–603 (2005)
Graves, M., Berry, E., Eng, A., Westhead, M., Black, R., Beacock, D., Kelly, S., Niemi, P.: A multicenter validation of an active contour-based left ventricular analysis technique. J. Magn. Reson Imaging 12, 232–239 (2000)
de Garcia, MM.P., Malpica, N., Ledesma-Carbayo, MJ., Jiménez-Borreguero, LJ., Santos, A.: Semi automatic estimation and visualization of left ventricle volumes in cardiac MRI. Computers in Cardiology 32, 399–402 (2005)
Tanki, N., Murase, K., Kumashiro, M., Momoi, R., Yang, X., Tabuchi, T., Nagayama, M., Watanabe, Y.: Quantification of left ventricular volumes from cardiac cine MRI using active contour model combined with gradient vector flow. Magn. Reson Med. Sci. 4, 191–196 (2005)
Jolly, M.: Automatic segmentation of the left ventricle in cardiac MRI and CT images. Int. J. Comput. Vis. 70, 151–163 (2006)
Spreeuwers, LJ., Bangma, SJ., Meerwaldt, RJHW., Vonken, EJ., Breeuwer, M.: Detection of trabeculae and papillary muscles in cardiac MR images. Computers in Cardiology 32, 415–418 (2005)
Meijster, A., Wilkinson, M.: A comparison of algorithms for connected Set Openings and Closings. IEEE Trans Patt Anal Mach Intell 24, 484–494 (2002)
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El Berbari, R. et al. (2007). Automated Segmentation of the Left Ventricle Including Papillary Muscles in Cardiac Magnetic Resonance Images. In: Sachse, F.B., Seemann, G. (eds) Functional Imaging and Modeling of the Heart. FIMH 2007. Lecture Notes in Computer Science, vol 4466. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-72907-5_46
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DOI: https://doi.org/10.1007/978-3-540-72907-5_46
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-540-72906-8
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