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A Hybrid Information Retrieval System for Medical Field Using MeSH Ontology

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Information Systems, Technology and Management (ICISTM 2009)

Abstract

Using semantic relations between different terms beside their syntactical similarities in a search engine would result in systems with better overall precision. One major problem in achieving such systems is to find an appropriate way of calculating semantic similarity scores and combining them with those of classic methods. In this paper, we propose a hybrid approach for information retrieval in medical field using MeSH ontology. Our approach contains proposing a new semantic similarity measure and eliminating records with semantic score less than a specific threshold from syntactic results. Proposed approach in this paper outperforms VSM, graph comparison, neural network, Bayesian network and latent semantic indexing based approaches in terms of precision vs. recall.

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References

  1. Agosti, M., Crestani, F., Gradenigo, G., Mattiello, P.: An Approach to Conceptual Modelling of IR Auxiliary Data. In: Proc. IEEE Int’l. Conf. Computer and Comm. (1990)

    Google Scholar 

  2. Jorvelin, K., Kekalainen, J., Niemi, T.: ExpansionTool: Concept-Based Query Expansion and Construction. Information Retrieval 4(3-4), 231–255 (2001)

    Article  MATH  Google Scholar 

  3. Deerwester, S., Dumais, D., Furnas, G., Landauer, T., Harshman, R.: Indexing by Latent Semantic Analysis. J. Am. Soc. Information Science 41(6), 391–407 (1990)

    Article  Google Scholar 

  4. Letsche, T.A., Berry, M.W.: Large-Scale Information Retrieval with Latent Semantic Indexing. Information Sciences—Applications 100(1-4), 105–137 (1997)

    Article  Google Scholar 

  5. Gonzalo, J., Verdejo, F., Chugur, I., Cigarran, J.: Indexing with WordNet Synsets Can Improve Text Retrieval. In: Proc. COLING/ ACL Workshop Usage of WordNet for Natural Language Processing (1998)

    Google Scholar 

  6. Madala, R., Takenobu, T., Hozumi, T.: The Use of WordNet in Information Retrieval. In: Proc. Conf. Use of WordNet in Natural Language Processing Systems, Montreal, pp. 31–37 (1998)

    Google Scholar 

  7. Christophides, V., Karvounarakis, G., Plexousakis, D., Tourtounis, S.: Optimizing Taxonomic Semantic Web Queries Using Labeling Schemes. J. Web Semantics 1(2), 207–228 (2003)

    Article  Google Scholar 

  8. Gauch, S., Chaffee, J., Pretschner, A.: Ontology-Based Personalized Search and Browsing. Web Intelligence and Agent Systems 1(3-4), 219–234 (2003)

    Google Scholar 

  9. Shah, U., Finin, T., Joshi, A.: Information retrieval on the semantic web. In: CIKM 2002: Proc. of the 11th Int. Conf. on Information and Knowledge Management (2002)

    Google Scholar 

  10. Mayfield, J., Finin, T.: Information Retrieval on the Semantic Web: Integrating Inference and Retrieval. In: Proc. Workshop Semantic Web at the 26th Int’l. ACM SIGIR Conf. Research and Development in Information Retrieval (2003)

    Google Scholar 

  11. Kiryakov, A., Popov, B., Terziev, I., Manov, D., Ognyanoff, D.: Semantic annotation, indexing, and retrieval. Journal of Web Semantics: Science, Services and Agents on the World Wide Web 2, 49–79 (2004)

    Article  Google Scholar 

  12. Guha, R., McCool, R., Miller, E.: Semantic search. In: WWW 2003: Proc. of the 12th Int. Conf. on World Wide Web (2003)

    Google Scholar 

  13. Davies, J., Krohn, U., Weeks, R.: Quizrdf: search technology for the semantic web. In: WWW 2002 Workshop on RDF & Semantic Web Applications, 11th Int. WWW Conf. (2002)

    Google Scholar 

  14. Rocha, C., Schwabe, D., Poggi de Aragao, M.: A hybrid approach for searching in the semantic web. In: Proc. of the 13th Int. Conf. on World Wide Web (WWW) (2004)

    Google Scholar 

  15. Corby, O., Dieng-Kuntz, R., Faron-Zucker, C., Gandon, F.: Searching the semantic web: Approximate query processing based on ontologies. IEEE Intelligent Systems 21(1), 20–27 (2006)

    Article  Google Scholar 

  16. Castells, P., Fernndez, M., Vallet, D.: An adaptation of the vector-space model for ontologybased information retrieval. IEEE Trans. Knowl. Data Eng. 19, 261–272 (2007)

    Article  Google Scholar 

  17. Knappe, R.: Measures of Semantic Similarity and Relatedness for Use in Ontology-based Information Retrieval, Ph.D. dissertation (2006)

    Google Scholar 

  18. Hliaoutakis, A.: Semantic Similarity Measures in MeSH Ontology and their application to Information Retrieval on Medline, Diploma Thesis, Technical Univ. of Crete (TUC), Dept. of Electronic and Computer Engineering, Chania, Crete, Greece (2005)

    Google Scholar 

  19. Li, Y., Bandar, Z., McLean, D.: An Approach for Measuring Semantic Similarity between Words Using Multiple Information Sources. IEEE Transactions on Knowledge and Data Engineering 45 (2003)

    Google Scholar 

  20. Leacock, C., Chodorow, M.: Filling in a sparse training space for word sense identication. Ms (1994)

    Google Scholar 

  21. Wu, Z., Palmer, M.: Verb Semantics and Lexical Selection. In: Proceedings of the 32nd Annual Meeting of the Associations for Computational Linguistics (ACL 1994), Las Cruces, New Mexico, pp. 133–138 (1994)

    Google Scholar 

  22. Dominich, S.: Connectionist Interaction Information Retrieval. Information Processing and Management 39(2), 167–194 (2003)

    Article  MATH  Google Scholar 

  23. Truong, D., Dkaki, T., Mothe, J., Charrel, J.: Information Retrieval Model based on Graph Comparison. In: International Days of Statistical Analysis of Textual Data (JADT 2008), Lyon, France (2008)

    Google Scholar 

  24. Indrawan, M.: A Framework for Information Retrieval Using Bayesian Networks, Monash University, PhD Thesis (1998)

    Google Scholar 

  25. Kumar, C.A., Srinivas, S.: Latent Semantic Indexing Using Eigenvalue Analysis for Efficient Information Retreival. Int. J. Appl. Math. Comput. Sci. (2006)

    Google Scholar 

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Jalali, V., Borujerdi, M.R.M. (2009). A Hybrid Information Retrieval System for Medical Field Using MeSH Ontology. In: Prasad, S.K., Routray, S., Khurana, R., Sahni, S. (eds) Information Systems, Technology and Management. ICISTM 2009. Communications in Computer and Information Science, vol 31. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-00405-6_7

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  • DOI: https://doi.org/10.1007/978-3-642-00405-6_7

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-00404-9

  • Online ISBN: 978-3-642-00405-6

  • eBook Packages: Computer ScienceComputer Science (R0)

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