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A Fuzzy One Class Classifier for Multi Layer Model

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Fuzzy Logic and Applications (WILF 2009)

Part of the book series: Lecture Notes in Computer Science ((LNAI,volume 5571))

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Abstract

The paper describes an application of a fuzzy one-class classifier (FOC) for the identification of different signal patterns embedded in a noise structured background. The classification phase is applied after a preprocessing phase based on a Multi Layer Model (MLM) that provides a preliminary signal segmentation in an interval feature space. The FOC has been tested on synthetic and real microarray data in the specific problem of DNA nucleosome and linker regions identification. Results have shown, in both cases, a good recognition rate.

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References

  1. Tax, D.M.J.: One-class classification, Ph.D. thesis (June 2001)

    Google Scholar 

  2. Manevitz, L., Yousef, M.: One-Class SVMs for Document Classification. Journal of Machine Learning Research 2, 139–154 (2001)

    MATH  Google Scholar 

  3. Wang, K., Stolfo, S.J.: One-Class Training for Masquerade Detection. In: Workshop on Data Mining for Computer Security, Melbourne, Florida, November 19-22, 2003, pp. 10–19 (2003)

    Google Scholar 

  4. Di Gesù, V., Lo Bosco, G.: Combining one class fuzzy kNN’s. In: Masulli, F., Mitra, S., Pasi, G. (eds.) WILF 2007. LNCS, vol. 4578, pp. 152–160. Springer, Heidelberg (2007)

    Chapter  Google Scholar 

  5. Di Gesú, V., Lo Bosco, G., Friedman, J.H.: Intruder Pattern Identification. In: Proc. of ICPR 2008 19th International Conference on Pattern Recognition, Tampa, Florida, USA, December 8-11, 2008, pp. 1–4. IEEE Computer Society Press, Los Alamitos (2008)

    Chapter  Google Scholar 

  6. Zeng, Z., Fu, Y., Roisman, G.I., Wen, Z., Hu, Y., Huang, T.S.: One-Class Classification for Spontaneous Facial Expression Analysis. In: IEEE Proceedings of the 7th International Conference on Automatic Face and Gesture Recognition, pp. 281–286 (2006)

    Google Scholar 

  7. Nanni, L.: Experimental comparison of one-class classifiers for online signature verification. Neurocomputing 69(7-9), 869–873 (2006)

    Article  Google Scholar 

  8. Di Gesù, V., Lo Bosco, G., Pinello, L.: A one class classifier for Signal identification: a biological case study. In: Lovrek, I., Howlett, R.J., Jain, L.C. (eds.) KES 2008, Part III. LNCS, vol. 5179, pp. 747–754. Springer, Heidelberg (2008)

    Chapter  Google Scholar 

  9. Yuan, G.C., Liu, Y.J., Dion, M.F., Slack, M.D., Wu, L.F., Altschuler, S.J., Rando, O.J.: Genome-Scale Identification of Nucleosome Positions in S. cerevisiae. Science 309, 626–630 (2005)

    Article  Google Scholar 

  10. Corona, D.F.V., Tamkun, J.W.: Multiple roles for ISWI in transcription, chromosome organization and DNA replication. Biochim Biophys Acta 1677(1-3), 113–119 (2004)

    Article  Google Scholar 

  11. Saha, A., Wittmeyer, J., Cairns, B.R.: Chromatin remodelling: The industrial revolution of DNA around histones. Nature Reviews Molecular Cell Biology 7, 437–447 (2006)

    Article  Google Scholar 

  12. Jacobson, S., Pillus, L.: Modifying chromatin and concepts of cancer. Current Opinion in Genetics and Development 9, 175–184 (1999)

    Article  Google Scholar 

  13. Corona, D.F.V., Di Gesú, V., Lo Bosco, G., Pinello, L., Yuan, G.C.: A new Multi-Layers Method to Analyze Gene Expression. In: Apolloni, B., Howlett, R.J., Jain, L. (eds.) KES 2007, Part III. LNCS, vol. 4694, pp. 862–869. Springer, Heidelberg (2007)

    Chapter  Google Scholar 

  14. Di Gesù, V., Lo Bosco, G., Pinello, L., Yuan, G.C., Corona, D.F.V.: A Multi-Layer Method to Study Genome-Scale Positions of Nucleosomes. Genomics 93(2), 140–145 (2009)

    Article  Google Scholar 

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Bosco, G.L., Pinello, L. (2009). A Fuzzy One Class Classifier for Multi Layer Model. In: Di Gesù, V., Pal, S.K., Petrosino, A. (eds) Fuzzy Logic and Applications. WILF 2009. Lecture Notes in Computer Science(), vol 5571. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-02282-1_16

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  • DOI: https://doi.org/10.1007/978-3-642-02282-1_16

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-02281-4

  • Online ISBN: 978-3-642-02282-1

  • eBook Packages: Computer ScienceComputer Science (R0)

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