Abstract
Nowadays, the improvements in Magnetic Resonance Imaging systems (MRI) provide new and aditional ways to diagnose some brain disorders such as schizophrenia or the Alzheimer’s disease. One way to figure out these disorders from a MRI is through image segmentation. Image segmentation consist in partitioning an image into different regions. These regions determine diferent tissues present on the image. This results in a very interesting tool for neuroanatomical analyses. Thus, the diagnosis of some brain disorders can be figured out by analyzing the segmented image. In this paper we present a segmentation method based on a supervised version of the Self-Organizing Maps (SOM). Moreover, a probability-based clustering method is presented in order to improve the resolution of the segmented image. On the other hand, the comparisons with other methods carried out using the IBSR database, show that our method ourperforms other algorithms.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
Similar content being viewed by others
References
Kapur, T., Grimson, W., Wells, I., Kikinis, R.: Segmentation of brain tissue from magnetic resonance images. Medical Image Analysis 1(2), 109–127 (1996)
Kennedy, D., Filipek, P., Caviness, V.: Anatomic segmentation and volumetric calculations in nuclear magnetic resonance imaging. IEEE Transactions on Medical Imaging 8(1), 1–7 (1989)
Smith, S., Brady, M., Zhang, Y.: Segmentation of brain images through a hidden Markov Random Field Model and the Expectation-Maximization Algorithm. IEEE Transactions on Medical Imaging 20(1) (2001)
Yang, Z., Laaksonen, J.: Interactive Retrieval in Facial Image Database Using Self-Organizing Maps. In: MVA (2005)
Tsai, Y., Chiang, I., Lee, Y., Liao, C., Wang, K.: Automatic MRI Meningioma Segmentation Using Estimation Maximization. In: Proceedings of the 27th IEEE Engineering in Medicine and Biology Annual Conference (2005)
Xie, J., Tsui, H.: Image Segmentation based on maximum-likelihood estimation and optimum entropy distribution (MLE-OED). Pattern Recognition Letters 25, 1133–1141 (2005)
Smith, S., Brady, M., Zhang, Y.: Segmentation of brain images through a hidden Markov Random Field Model and the Expectation-Maximization Algorithm. IEEE Transactions on Medical Imaging 20(1) (2001)
Wells, W., Grimson, W., Kikinis, R., Jolesz, F.: Adaptive segmentation of MRI data. IEEE Transactions on Medical Imaging 15(4), 429–442 (1996)
Mohamed, N., Ahmed, M., Farag, A.: Modified fuzzy c-mean in medical image segmentation. In: IEEE International Conference on Acoustics, Speech and Signal Processing (1999)
Parra, C., Iftekharuddin, K., Kozma, R.: Automated Brain Tumor Segmentation and Pattern recognition using AAN. In: Computational Intelligence, Robotics and Autonomous Systems
Sahoo, P., Soltani, S., Wong, A., Chen, Y.: A survey of thresholding techniques. Computer Vision, Graphics Image Process. 41, 233–260
Yang, Z., Laaksonen, J.: Interactive Retrieval in Facial Image Database Using Self-Organizing Maps. In: MVA (2005)
Güler, I., Demirhan, A., Karakis, R.: Interpretation of MR images using self-organizing maps and knowledge-based expert systems. Digital Signal Processing 19, 668–677 (2009)
Ong, S., Yeo, N., Lee, K., Venkatesh, Y., Cao, D.: Segmentation of color images using a two-stage self-organizing network. Image and Vision Computing 20, 279–289 (2002)
Alirezaie, J., Jernigan, M., Nahmias, C.: Automatic segmentation of cerebral MR images using artificial neural Networks. IEEE Transactions on Nuclear Science 45(4), 2174–2182 (1998)
Sun, W.: Segmentation method of MRI using fuzzy Gaussian basis neural network. Neural Information Processing 8(2), 19–24 (2005)
Fan, L., Tian, D.: A brain MR images segmentation method based on SOM neural network. In: IEEE International Conference on Bioinformatics and Biomedical Engineering (2007)
Kohonen, T.: Self-Organizing Maps, 3rd edn. Springer, Heidelberg (2001)
Haralick, R.M., Shanmugam, K., Dinstein, I.: Textural features for image classification. IEEE Transactions on Systems and Cybernet. 6, 610–621 (1973)
Greenspan, H., Ruf, A., Goldberger, J.: Constrained Gaussian Mixture Model Framework for Automatic Segmentation of MR Brain Images. IEEE Transactions on Medical Imaging 25(10), 1233–1245
Hodgson, M.E.: What Size Window for Image Classification? A Cognitive Perspective. Photogrammetric Engineering & Remote Sensing. American Society for Photogrammetry and Remote Sensing 64(8), 797–807
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2011 Springer-Verlag Berlin Heidelberg
About this paper
Cite this paper
Ortiz, A., Gorriz, J.M., Ramirez, J., Salas-Gonzalez, D. (2011). MRI Brain Image Segmentation with Supervised SOM and Probability-Based Clustering Method. In: Ferrández, J.M., Álvarez Sánchez, J.R., de la Paz, F., Toledo, F.J. (eds) New Challenges on Bioinspired Applications. IWINAC 2011. Lecture Notes in Computer Science, vol 6687. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-21326-7_6
Download citation
DOI: https://doi.org/10.1007/978-3-642-21326-7_6
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-642-21325-0
Online ISBN: 978-3-642-21326-7
eBook Packages: Computer ScienceComputer Science (R0)