Skip to main content

Knowledge Discovery and Expert Knowledge for Creating a Chart-Model of a Biological Network - Introductory to Research in Chronic Diseases and Comorbidity

  • Conference paper
Information Quality in e-Health (USAB 2011)

Part of the book series: Lecture Notes in Computer Science ((LNPSE,volume 7058))

Included in the following conference series:

Abstract

By using an example of low antibody response to influenza vaccination, a new methodology approach is presented here, which can be introductory to research in chronic aging diseases, typically characterized with comorbidity. Starting with poor theory, this approach includes systematic health data record and approximate learning based on using data mining methods. By subsequent data mining, applied on already selected parameters, and supported by expert knowledge, selected health parameters can further be transformed, into functional pathophisiologic units. Graphical presentation of identified health disorders and their integration into a comprehensive visual model of the common biological network, provides additional information and improves our understanding of the topic, and can serve as a starting position for further research. In terms of Human-Computer Interaction, this approach seems challenging, by enabling computer automatic methods to be supported by human‘s cognitive processes, which might be a solution when managing massive biomedical data, usually weakly structured.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Pearce, N.: Traditional epidemiology, modern epidemiology and public health. American Journal of Health 86, 678–683 (1996)

    Article  Google Scholar 

  2. Rockhill, B.: Theorizing about causes at the individual level while estimating effects at the population level. Implication for prevention. Epidemiology 16, 124–129 (2005)

    Article  Google Scholar 

  3. Cooper, J.A., Miller, G.J., Humphries, S.E.: A comparison of the PROCAM and Framingham point-scoring systems for estimation of individual risk of coronary heart disease in the Second Northwick Park Heart Study. Atherosclerosis 181, 93–100 (2005)

    Article  Google Scholar 

  4. Dawes, M.: Co-morbidity: we need a guideline for each patient not a guideline for each disease. Family Practice 27, 1–2 (2010)

    Article  Google Scholar 

  5. Yang, Q., Khoury, M.J., Friedman, J.M., Little, J., Flanders, W.D.: How many genes underlie the occurence of common complex diseases in the population. International Journal of Epidemiology 34(5), 1129–1137 (2005)

    Article  Google Scholar 

  6. Rosser, W.W.: Aplication of evidence from randomized controlled trials to general practice. The Lancet 353, 661–664 (1999)

    Article  Google Scholar 

  7. Holzinger, A.: Interacting with Information: Challenges in Human-Computer Interaction and Information Retrieval (HCI-IR). In: IADIS Multiconference on Computer Science and Information Systems (MCCSIS), Interfaces and Human-Computer Interaction, pp. 13–17. IADIS, Rome (2011)

    Google Scholar 

  8. Campbell, M.J.: Statistics at square two, 2nd edn. Blackwell Publishing, Oxford (2006)

    Book  Google Scholar 

  9. Gijsen, R., Hoeymans, N., Schellevis, F.G., Ruwaard, D., Satariano, W.A., van den Bos, G.A.M.: Causes and consequences of comorbidity: a review. Journal of Clinical Epidemiology 54, 661–674 (2001)

    Article  Google Scholar 

  10. Kriete, A., Sokhansan, J., Bacoppock, D.L., West, G.B.: Systems approaches to the networks of aging. Ageing Research Reviews 5, 434–448 (2006)

    Article  Google Scholar 

  11. Lipsitz, L.A.: Dynamics of stability: the physiologic basis of functional health and frailty. Journal of Gerontology 57(A), 115–125 (2002)

    Google Scholar 

  12. Plsek, P.E., Greenhalgh, T.: The challenge of complexity in health care. British Medical Journal 323, 625–628 (2001)

    Article  Google Scholar 

  13. Fayyad, U., Piatetsky-Shapiro, G., Smyth, P.: From data mining to knowledge discovery in databases, http://www.daedalus.es/fileadmin/daedalus/doc/MineriaDeDatos/fayyad96.pdf (last access: July 20, 2011)

  14. Witten, I.H., Frank, E.: Data mining. Practical machine learning tools and techniques, 2nd edn. Elsevier, Morgan Kaufmann Publishers, San Francisco (2005)

    MATH  Google Scholar 

  15. Gamberger, D., Šmuc, T.: Data Mining Server. Zagreb: Institute Rudjer Bošković. Laboratory for Information Systems, http://dms.irb.hr (last access: June 15, 2011)

  16. Sonicki, Z., Gamberger, D., Šmuc, T., Sonicki, D., Kern, J.: Data Mining Server-On-line Knowledge Induction tool. Study in Health Technology and Informatics 90, 330–334 (2002)

    Google Scholar 

  17. Schroecksnadel, K., Frick, B., Wirleitner, B., Winkler, C., Schennach, H., Fuchs, D.: Moderate hyperhomocysteinemia and immune activation. Current Pharmaceutical Biotechnology 5, 107–118 (2004)

    Article  Google Scholar 

  18. Pecoits-Filho, R., Lindholm, B., Stenvinkel, P.: The malnutrition, inflammation and atherosclerosis (MIA) syndrome - the heart of the matter. Nephrology Dialysis Transplantation 17(S11), 28–31 (2002)

    Article  Google Scholar 

  19. Futagami, S., Takahashi, H., Norose, Y., Kobayashi, M.: Systemic and local immune responses against Helicobacter pylori urease in patients with chronic gastritis; distinct IgA and IgG productive sites. GUT 43, 168–175 (1998)

    Article  Google Scholar 

  20. Magri, F., Cravello, L., Barili, L., Sarra, S., Cinchetti, W., Salmoiraghi, F., et al.: Stress and dementia: the role of the hypothalamopituitaryadrenal axis. Aging Clinical Experimental Research 18(2), 167–170 (2006)

    Article  Google Scholar 

  21. Gross, P.A., Hermogenes, A.W., Sacks, H.S., Lau, J., Levandowski, R.A.: The efficacy of influenza vaccine in elderly persons. A meta-analysis and review of the literature. Annals in Internal Medicine 123, 518–527 (1995)

    Article  Google Scholar 

  22. Holzinger, A.: Usability engineering methods for software developers. Communications of the ACM 48, 71–74 (2005)

    Article  Google Scholar 

  23. Majnarić-Trtica, L., Vitale, B., Martinis, M., Reiner, Ž.: A view at the future - a dynamical, protocol-based and computationally intensive approach in cardiovascular risk assessment. Collegium Antropologicum 34(2), 437–445 (2010)

    Google Scholar 

  24. Piaget, J.: The psychology of intelligence, 5th edn. Routledge classics, London (2008)

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2011 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Trtica-Majnarić, L. (2011). Knowledge Discovery and Expert Knowledge for Creating a Chart-Model of a Biological Network - Introductory to Research in Chronic Diseases and Comorbidity. In: Holzinger, A., Simonic, KM. (eds) Information Quality in e-Health. USAB 2011. Lecture Notes in Computer Science, vol 7058. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-25364-5_24

Download citation

  • DOI: https://doi.org/10.1007/978-3-642-25364-5_24

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-25363-8

  • Online ISBN: 978-3-642-25364-5

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics