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A Multivariate Approach to Estimate Complexity of FMRI Time Series

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Artificial Neural Networks and Machine Learning – ICANN 2012 (ICANN 2012)

Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 7553))

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Abstract

Modern functional brain imaging methods (e.g. functional magnetic resonance imaging, fMRI) produce large amounts of data. To adequately describe the underlying neural processes, data analysis methods are required that are capable to map changes of high-dimensional spatio-temporal patterns over time. In this paper, we introduce Multivariate Principal Subspace Entropy (MPSE), a multivariate entropy approach that estimates spatio-temporal complexity of fMRI time series. In a temporally sliding window, MPSE measures the differential entropy of an assumed multivariate Gaussian density, with parameters that are estimated based on low-dimensional principal subspace projections of fMRI images. First, we apply MPSE to simulated time series to test how reliably it can differentiate between state phases that differ only in their intrinsic dimensionality. Secondly, we apply MPSE to real-world fMRI data of subjects who were scanned during an emotional task. Our findings suggest that MPSE might be a valid descriptor of spatio-temporal complexity of brain states.

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References

  1. Anders, S., Heinzle, J., Weiskopf, N., Ethofer, T., Haynes, J.D.: Flow of affective information between communicating brains. NeuroImage 54(1), 439–446 (2011)

    Article  Google Scholar 

  2. Bishop, C.M.: Pattern Recognition and Machine Learning. Springer, New York (2006)

    MATH  Google Scholar 

  3. Dhamala, M., Pagnoni, G., Wiesenfeld, K., Berns, G.S.: Measurements of brain activity complexity for varying mental loads. Physical Review E - Statistical, Nonlinear and Soft Matter Physics 65(4), 041917-1–041917-7 (2002)

    Google Scholar 

  4. Holmes, A.P., Poline, J.B., Friston, K.J.: Characterizing brain images with the general linear model. In: Human Brain Function, pp. 59–84. Academic Press, USA (1997)

    Google Scholar 

  5. Hoyle, D.C.: Automatic PCA Dimension Selection for High Dimensional Data and Small Sample Sizes. Journal of Machine Learning Research 9, 2733–2759 (2008)

    MATH  Google Scholar 

  6. Johnson, R.A., Wichern, D.W.: Applied Multivariate Statistical Analysis. Prentice Hall, New Jersey (1998)

    Google Scholar 

  7. Shannon, C.E.: A Mathematical Theory of Communication. The Bell System Technical Journal 27, 423, 623–656 (1948)

    Google Scholar 

  8. Tzourio-Mazoyer, N., Landeau, B., Papathanassiou, D., Crivello, F., Etard, O., Delcroix, N., Mazoyer, B., Joliot, M.: Automated anatomical labeling of activations in spm using a macroscopic anatomical parcellation of the mni mri single-subject brain. NeuroImage 15(1), 273–289 (2002)

    Article  Google Scholar 

  9. Wellcome Trust Centre for Neuroimaging, Statistical Parametric Mapping, SPM5, http://www.fil.ion.ucl.ac.uk/spm/software/spm5/

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© 2012 Springer-Verlag Berlin Heidelberg

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Schütze, H., Martinetz, T., Anders, S., Madany Mamlouk, A. (2012). A Multivariate Approach to Estimate Complexity of FMRI Time Series. In: Villa, A.E.P., Duch, W., Érdi, P., Masulli, F., Palm, G. (eds) Artificial Neural Networks and Machine Learning – ICANN 2012. ICANN 2012. Lecture Notes in Computer Science, vol 7553. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-33266-1_67

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  • DOI: https://doi.org/10.1007/978-3-642-33266-1_67

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-33265-4

  • Online ISBN: 978-3-642-33266-1

  • eBook Packages: Computer ScienceComputer Science (R0)

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