Skip to main content

Building a Library of Eligibility Criteria to Support Design of Clinical Trials

  • Conference paper
Knowledge Engineering and Knowledge Management (EKAW 2012)

Part of the book series: Lecture Notes in Computer Science ((LNAI,volume 7603))

Abstract

The completion of clinical trial depends on sufficient participant enrollment, which is often problematic due to the restrictiveness of eligibility criteria, and effort required to verify patient eligibility. The objective of this research is to support the design of eligibility criteria, enable the reuse of structured criteria and to provide meaningful suggestions of relaxing them based on previous trials. The paper presents the first steps, a method for automatic comparison of criteria content and the library of structured and ordered eligibility criteria that can be browsed with the fine-grained queries. The structured representation consists of the automatically identified contextual patterns and semantic entities. The comparison of criteria is based on predefined relations between the patterns, concept equivalences defined in medical ontologies, and finally on threshold values. The results are discussed from the perspective of the scope of the eligibility criteria covered by our library.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Cuggia, M., Besana, P., Glasspool, D.: Comparing semi-automatic systems for recruitment of patients to clinical trials. International Journal of Medical Informatics 80(6), 371–388 (2011)

    Article  Google Scholar 

  2. Milian, K., ten Teije, A., Bucur, A., van Harmelen, F.: Patterns of Clinical Trial Eligibility Criteria. In: Riaño, D., ten Teije, A., Miksch, S. (eds.) KR4HC 2011. LNCS, vol. 6924, pp. 145–157. Springer, Heidelberg (2012)

    Chapter  Google Scholar 

  3. Cunningham, H., Maynard, D., Bontcheva, K., Tablan, V.: GATE: A framework and graphical development environment for robust NLP tools and applications. In: Proceedings of the 40th Anniversary Meeting of the ACL (2002)

    Google Scholar 

  4. Aronson, A.R.: Metamap: Mapping text to the umls metathesaurus. In: Proceedings AMIA Symposium (2001)

    Google Scholar 

  5. G. Units, Units (November 2006), http://www.gnu.org/software/units/

  6. Hassanzadeh, O., Kementsietsidis, A., Lim, L., Miller, R.J., Wang, M.: Linkedct: A linked data space for clinical trials, CoRR abs/0908.0567

    Google Scholar 

  7. Wang, S., Ohno-Machado, L., Mar, P., Boxwala, A., Greenes, R.: Enhancing arden syntax for clinical trial eligibility criteria. In: Proceedings AMIA Symposium

    Google Scholar 

  8. Sordo, M., Ogunyemi, O., Boxwala, A.A., Greenes, R.A.: Gello: An object-oriented query and expression language for clinical decision support. In: Proceedings AMIA Symposium, vol. (5), p. 1012 (2003)

    Google Scholar 

  9. Tu, S., Peleg, M., Carini, S., Rubin, D., Sim, I.: Ergo: A templatebased expression language for encoding eligibility criteria. Tech. rep. (2009)

    Google Scholar 

  10. Weng, C., Tu, S.W., Sim, I., Richesson, R.: Formal representations of eligibility criteria: A literature review. Journal of Biomedical Informatics (2009)

    Google Scholar 

  11. Tu, S., Peleg, M., Carini, S., Bobak, M., Rubin, D., Sim, I.: A practical method for transforming free-text eligibility criteria into computable criteria

    Google Scholar 

  12. Cheng, X.-y., Chen, X.-h., Hua, J.: The overview of entity relation extraction methods. Intelligent Computing and Information Science 134, 749–754 (2011)

    Article  Google Scholar 

  13. Nammuni, K., Pickering, C., Modgil, S., Montgomery, A., Hammond, P., Wyatt, J.C., Altman, D.G., Dunlop, R., Potts, H.W.W.: Design-a-trial: a rule-based decision support system for clinical trial design. Knowledge-Based Systems

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2012 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Milian, K., Bucur, A., van Harmelen, F. (2012). Building a Library of Eligibility Criteria to Support Design of Clinical Trials. In: ten Teije, A., et al. Knowledge Engineering and Knowledge Management. EKAW 2012. Lecture Notes in Computer Science(), vol 7603. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-33876-2_29

Download citation

  • DOI: https://doi.org/10.1007/978-3-642-33876-2_29

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-33875-5

  • Online ISBN: 978-3-642-33876-2

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics