Skip to main content

An Estimation of Cell Forces with Hierarchical Bayes Approach Considering Cell Morphology

  • Conference paper
Neural Information Processing (ICONIP 2012)

Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 7663))

Included in the following conference series:

  • 3148 Accesses

Abstract

Traction Force Microscopy (TFM) is one of popular techniques for measuring mechanical forces in a cell. TFM estimates the traction forces a cell produces from the displacements of the fluorescent nano beads in the culture gel substrate of the cell. However, the estimation is difficult due to the limitation in the distirubtion of beads. To improve the estimation accuracy, we proposed a Bayesian estimation method that introduces priors to the cell morphology and the force directions and simultaneously estimates the forces and the parameters with the expectation-maximization algorithm. Our method significantly improved the accuracy in our numerical experiments using synthetic and experimental datasets compared with the conventional ridge regression method.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Beningo, K.A., Wang, Y.L.: Flexible substrata for the detection of cellular traction forces. Trends Cell Biol. 12, 79–84 (2002)

    Article  Google Scholar 

  2. Roy, P., Rajfur, Z., Pomorski, P., Jacobson, K.: Microscope based-techniques to study cell adhesion and migration. Nat. Cell Biol. 4, 91–96 (2002)

    Article  Google Scholar 

  3. Chan, C.E., Odde, D.J.: Traction dynamics of filopodia on compliant substrates. Science 322, 1687–1691 (2008)

    Article  Google Scholar 

  4. Wang, Y.-L., Pelham, R.J.: Preparation of a flexible, porous polyacrylamide substrate for mechanical studies of cultured cells. Methods Enzymol. 298, 489–496 (1998)

    Article  Google Scholar 

  5. Sabass, B., Gardel, M.L., Waterman, C.M., Schwarz, U.S.: High Resolution Traction Force Microscopy Based on Experimental and Computational Advances. Biophisical Journal 94, 207–220 (2008)

    Article  Google Scholar 

  6. Landau, L.D., Lifshitz, E.M.: Theory of elasticity, 2nd edn. Course of Theoretical Physics, vol. 7. Pergamon Press, Oxford (1970)

    Google Scholar 

  7. Butler, J.P., Tolic-Norrelykkex, I.M., Fabry, B., Fredberg, J.J.: Traction fields, moments, and strain energy that cells exert on their surroundings. Am. J. Physiol. Cell Physiol. 282, 595–605 (2002)

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2012 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Kozawa, S., Sakumura, Y., Toriyama, M., Inagaki, N., Ikeda, K. (2012). An Estimation of Cell Forces with Hierarchical Bayes Approach Considering Cell Morphology. In: Huang, T., Zeng, Z., Li, C., Leung, C.S. (eds) Neural Information Processing. ICONIP 2012. Lecture Notes in Computer Science, vol 7663. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-34475-6_60

Download citation

  • DOI: https://doi.org/10.1007/978-3-642-34475-6_60

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-34474-9

  • Online ISBN: 978-3-642-34475-6

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics