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Variational Registration

A Flexible Open-Source ITK Toolbox for Nonrigid Image Registration

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Bildverarbeitung für die Medizin 2015

Part of the book series: Informatik aktuell ((INFORMAT))

Abstract

In this article, we present the flexible open-source toolbox “VariationalRegistration” for non-parametric variational image registration, realized as a module in the Insight segmentation and registration toolkit. The toolbox is designed to test, evaluate and systematically compare the effects of different building blocks of variational registration approaches, i.e. the distance/similarity measure, the regularization method and the transformation model. In its current state, the framework includes implementations of different similarity measures and regularization methods, as well as displacement-based and diffeomorphic transformation models. The implementation of further components is possible and encouraged. The implemented algorithms were applied to different registration problems and extensively tested using publicly accessible image data bases. This paper presents a quantitative evaluation for inter-patient registration using 3D brain MR images of the LONI image data base. The results demonstrate that the implemented variational registration scheme is competitive with other state-of-the-art approaches for non-rigid image registration.

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References

  1. Werner R, Schmidt-Richberg A, Handels H, et al. Estimation of lung motion fields in 4D CT data by variational non-linear intensity-based registration: a comparison and evaluation study. Phys Med Biol. 2014;59(15):4247–60.

    Article  Google Scholar 

  2. Klein A, Andersson J, Ardekani BA, et al. Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration. NeuroImage. 2009;46:786–802.

    Article  Google Scholar 

  3. van Rikxoort EM, , Isgum I, , Arzhaeva Y, et al. Adaptive local multi-atlas segmentation: application to the heart and the caudate nucleus. Med Image Anal. 2010;14(1):39–49.

    Google Scholar 

  4. Murphy K, van Ginneken B, Reinhardt J, et al. Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge. IEEE Trans Med Imaging. 2011;30(11):1901–20.

    Article  Google Scholar 

  5. Brock KK, Consortium DRA. Results of a multi-institution deformable registration accuracy study (MIDRAS). Int J Radiat Oncol Biol Phys. 2010;76(2):583–96.

    Article  Google Scholar 

  6. Shattuck DW, Mirza M, Adisetiyo V, et al. Construction of a 3D probabilistic atlas of human cortical structures. NeuroImage. 2008;39(3):1064–80.

    Article  Google Scholar 

  7. Modersitzki J. Numerical Methods for Image Registration. Oxford University Press; 2003.

    Google Scholar 

  8. Schmidt-Richberg A, Werner R, Handels H, et al. A flexible variational registration framework. Insight J. 2014.

    Google Scholar 

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Correspondence to Jan Ehrhardt .

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© 2015 Springer-Verlag Berlin Heidelberg

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Ehrhardt, J., Schmidt-Richberg, A., Werner, R., Handels, H. (2015). Variational Registration. In: Handels, H., Deserno, T., Meinzer, HP., Tolxdorff, T. (eds) Bildverarbeitung für die Medizin 2015. Informatik aktuell. Springer Vieweg, Berlin, Heidelberg. https://doi.org/10.1007/978-3-662-46224-9_37

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  • DOI: https://doi.org/10.1007/978-3-662-46224-9_37

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  • Publisher Name: Springer Vieweg, Berlin, Heidelberg

  • Print ISBN: 978-3-662-46223-2

  • Online ISBN: 978-3-662-46224-9

  • eBook Packages: Computer Science and Engineering (German Language)

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