Summary
The CASE (Computer Automated Structure Evaluation) program, with the aid of a geometry index for discriminating cis and trans isomers, has been used to study a set of retinoids tested for teratogenicity in hamsters. CASE identified 8 fragments, the most important representing the non-polar terminus of a retinoid with an additional ring system which introduces some rigidity in the isoprenoid side chain. The geometry index helped to identify relevant fragments with an all-trans configuration and to distinguish them from irrelevant fragments with other configurations.
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References
Moore, T., Vitamin A, Elsevier, Amsterdam, 1957.
Dowling, J.E. and Wald, G., Proc. Natl. Acad. Sci. U.S.A., 26 (1960) 587.
Pawson, B.A., J. Am. Acad. Dermatol., 55 (1982) 340.
Thompson, J.N., Howell, J.McC. and Pitt, G.A.J., Proc. R. Soc. London, Ser. B., 159 (1964) 510.
Takahashi, Y.I., Smith, J.E., Winick, M. and Goodman, D.S., J. Nutr., 105 (1975) 1299.
Rosa, F.W., Lancet, ii (1983) 513.
Stern, R.S., Rosa, F. and Baum, C., J. Am. Acad. Dermatol., 10 (1984) 851.
Nadelson, C.C., Notman, M.T. and Gillon, J.M., Obstet. Gynecol., 55 (1980) 340.
Willhite, C.C., Dawson, M.I. and Williams, K.J., Toxicol. Appl. Pharmacol., 74 (1984) 397.
Willhite, C.C., Toxicol. Appl. Pharmacol., 83 (1986) 563.
Howard, W.B., Willhite, C.C., Dawson, M.I. and Sharma, R.P., Toxicol. Appl. Pharmacol., 95 (1988) 122.
Klopman, G. and Kalos, A., Mol. Toxicol., 1 (1987) 61.
Klopman, G. and Macina, O., Mol. Pharmacol., 31 (1987) 457.
Klopman, G., Macina, O., Levinson, M. and Rosenkranz, H., Antimicrob. Agents Chemother., 31 (1987) 1831.
Klopman, G. and Dimayuga, M., Mol. Pharmacol., 34 (1988) 218.
Klopman, G., J. Am. Chem. Soc., 106 (1984) 7315.
Klopman, G., Frierson, M. and Rosenkranz, H., Environ. Mutagen., 7 (1985) 625.
Klopman, G. and Venegas, R., Acta Pharm. Jugosl., 36 (1986) 189.
Willhite, C.C., In Dawson, M.I. and Okamura, W.H. (Eds.) Chemistry and Biology of Synthetic Retinoids, CRC Press, Boca Raton, FL, 1989, in press.
Klopman, G. and McGonigal, M., J. Inf. Comput. Sci., 21 (1981) 48.
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Klopman, G., Dimayuga, M.L. Computer Automated Structure Evaluation (CASE) of the teratogenicity of retinoids with the aid of a novel geometry index. J Computer-Aided Mol Des 4, 117–130 (1990). https://doi.org/10.1007/BF00125314
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DOI: https://doi.org/10.1007/BF00125314