Skip to main content
Log in

Perfect simulation and inference for point processes given noisy observations

  • Published:
Computational Statistics Aims and scope Submit manuscript

Summary

The paper is concerned with the exact simulation of an unobserved true point process conditional on a noisy observation. We use dominated coupling from the past (CFTP) on an augmented state space to produce perfect samples of the target marked point process. An optimized coupling of the target chains makes the algorithm considerable faster than with the standard coupling used in dominated CFTP for point processes. The perfect simulations are used for inference and the results are compared to an ordinary Metropolis-Hastings sampler.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Figure 1
Figure 2
Figure 3
Figure 4

Similar content being viewed by others

References

  • Cai, Y. & Kendall, W. S. (2002), ‘Perfect simulation for correlated Poisson random variables conditioned to be positive’,Statistics and Computing 12, 229–243.

    Article  MathSciNet  Google Scholar 

  • Dralle, K. & Rudemo, M. (1996), ‘Stem number estimation by kernel smoothing of aerial photos’,Canad. J. Forest Res. 26, 1228–1236.

    Article  Google Scholar 

  • Dralle, K. & Rudemo, M. (1997), ‘Automatic estimation of individual tree positions from aerial photos’,Canad. J. Forest Res. 27, 1728–1736.

    Article  Google Scholar 

  • Fill, J. A.(1998), ‘An interruptible algorithm for perfect sampling via Markov chainsrs,Ann. Appl. Probab.8, 131–162.

    Article  MathSciNet  Google Scholar 

  • Geyer, C. J. & Møller, J. (1994), ‘Simulation procedures and likelihood inference for spatial point processes’,Scand. J. of Statist.21(4), 359–373.

    MathSciNet  MATH  Google Scholar 

  • Kendall, W. S. & Møller, J. (2001), ‘Perfect simulation using dominating processes on ordered spaces, with application to locally stable point processes’,Adv.in Appl. Probab.32, 844–865.

    Article  MathSciNet  Google Scholar 

  • Kendall, W. & Thönnes, E. (1999), ‘Perfect simulation in stochastic geometry’,Pattern Recognition 32, 1569–1586.

    Article  Google Scholar 

  • Larsen, M. & Rudemo, M. (1998), ‘Optimizing templates for finding trees in aerial photographs’,Pattern Recognition Letters 19, 1153–1162.

    Article  Google Scholar 

  • Lund, J., Penttinen, A. & Rudemo, M. (1999), Bayesian analysis of spatial point patters from noisy observations, Preprint, Department of Mathematics and Physics, The Royal Veterinary and Agricultural University.

  • Lund, J. & Rudemo, M. (2000), ‘Models for point processes observed with noise’,Biometrika 87(2), 235–249.

    Article  MathSciNet  Google Scholar 

  • Møller, J. (1999), ‘Perfect simulation of conditionally specified models’,J. Roy. Statist. Soc. Ser. B 61(1), 251–264.

    Article  MathSciNet  Google Scholar 

  • Møller, J. (2001), A review on perfect simulation in stochastic geometry,in C. C. H. I. V. Basawa & R. L. Taylor, eds, ‘Selected Proceedings of the Symposium on Inference for Stochastic Processes’, Vol. 37 ofIMS Lecture Notes & Monographs, pp. 333–355.

  • Møller, J. & Nicholls, G. K. (1999), Perfect simulation for sample-based inference, Research report R-99–2011, Aalborg University, Department of Mathematics. To appear in Statistics and Computing (conditionally accepted).

  • Møller, J. (1999), Markov Chain Monte Carlo and Spatial Point Processes,in O. Barndorff-Nielsen, W. Kendall & M. van Lieshout, eds, ‘Stochastic Geometry: likelihood and computation’, Chapman & Hall/CRC, Boca Raton, pp. 141–172.

    Google Scholar 

  • Murdoch, D. J. & Green, P. J. (1998), ‘Exact sampling from a continuous state space’, Scand. J. of Statist.25, 483–502.

    Article  MathSciNet  Google Scholar 

  • Preston, C. (1975), ‘Spatial birth-and-death processes’,Bull. Internal. Statist. Inst. 46, 371–391.

    MathSciNet  MATH  Google Scholar 

  • Propp, J. & Wilson, D. (1996), ‘Exact sampling with coupled Markov chains and applications to statistical mechanics’,Random Structures and Algorithms 9, 223–252.

    Article  MathSciNet  Google Scholar 

  • Strauss, D. (1975), ‘A model for clustering’,Biometrika 63, 467–475.

    Article  MathSciNet  Google Scholar 

Download references

Acknowledgements

Elke Thönnes thanks for the support by the EU TMR network ERB-FMRXCT96- 0096 and the Stochastic Centre at Chalmers University. Both authors acknowledge the support by the ESF program “Highly structured stochastic systems”. We are grateful to Ib Skovgaard, Wilfrid Kendall and Jesper Møller for inspiring discussions. We also thank Mats Rudemo for helpful comments, and the Danish Forest and Landscape Research Institute for access to the data.

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Lund, J., Thönnes, E. Perfect simulation and inference for point processes given noisy observations. Computational Statistics 19, 317–336 (2004). https://doi.org/10.1007/BF02892063

Download citation

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF02892063

Keywords

Navigation