Abstract
Scientific databases are used to accession objects representing the results of scientific inquiry, such as genes and DNA sequences. These objects must have stable identifiers that can be used as references in scientific papers and other databases. The requirement for stable object identifiers, however, conflicts with the tendency of scientific data to evolve over time. We present in this paper version management facilities that allow scientific databases to achieve a balance between stable object identifiers and evolving data.
Preview
Unable to display preview. Download preview PDF.
References
Ahmed, R., Navathe, S.B. Version Management of Composite Objects in CAD Databases. Proceedings of the ACM SIGMOD Conference (1991), 218–227.
Banerjee, J. et al. Data Model Issues for Object-Oriented Applications. ACM Transactions on Office Information Systems 5, 1 (January 1987), 3–26.
Bancilhon, F., Delobel. C., Kanellakis, P. Building an Object-Oriented Database System: The Story of O2. Morgan Kaufmann Publishers, Inc. (1992).
Beech, D., Mahbod, B. Generalized Version Control in an Object-Oriented Database. Proceedings of the 5th International Conference on Data Engineering (1988), 14–22.
Chen, I.A., Markowitz, V.M.: An Overview of the Object-Protocol Model (OPM) and the OPM Data Management Tools. Information Systems 20, 5 (1995) 393–417. Additional information available on the World Wide Web at http://gizmo.lbl.gov/opm.html.
Chou, H.-T., Kim, W. A Unified Framework for Version Control in a CAD Environment. Proceedings of the 12th International Conference on Very Large Data Bases (1986), 336–344.
Dadam, P., Lum, V., Werner, H.-D. Integration of Time Versions into a Relational Database System. Proceedings of the 10th International Conference on Very Large Data Bases (1984), 509–522.
Date, C.J. Referential Integrity, in Relational Database — Selected Writings. Addison-Wesley (1986).
Dittrich, K.R., Lorie, R.A. Version Support for Engineering Database Systems. IEEE Trans. on Software Engineering 14, 4 (April 1988), 429–437.
Goodman, N. An Object-Oriented DBMS War Story: Developing a Genome Mapping Database in C++. In W. Kim (ed.), Modern Database Management: Object-Oriented and Multidatabase Techniques, ACM Press (1994), 216–237.
Hammer, M., McLeod, D. Database Description with SDM: A Semantic Database Model. ACM Trans. on Database Systems 6, 3, (September 1981), 351–386.
Hull, R., King, R. Semantic Database Modeling: Survey, Applications, and Research Issues. ACM Computing Surveys 19, 3 (September 1987), 201–260.
Käfer, W., Schöning, H. Mapping a Version Model to a Complex-Object Data Model. Proceedings of the 8th International Conference on Data Engineering (1992), 348–357.
Katz, R.H., Chang, E., Bhateja, R. Version Modeling Concepts for Computer-Aided Design Databases. Proceedings of the ACM SIGMOD Conference (1986), 379–386.
Katz, R.H., Chang, E. Managing Change in a Computer-Aided Design Database. Proceedings of the 13th International Conference on Very Large Data Bases (1987), 455–462.
Katz, R.H. Toward a Unified Framework for Version Modeling in Engineering Databases. ACM Computing Surveys 22, 4 (December 1990), 375–408.
Kim, W., et al. Composite Object Support in an Object-Oriented Database System. Proceedings of the OOPSLA'87 Conference (1987).
Klahold, P., Schlageter, G., and Wilkes, W. A General Model for Version Management in Databases. Proceedings of the 12th International Conference on Very Large Data Bases (1986), 319–327.
Sciore, E. Versioning and Configuration Management in an Object-Oriented Data Model. VLDB Journal 3 (1994), 77–106.
Woelk, D., Kim, W., Luther, W. An Object-Oriented Approach to Multimedia Databases. Proceedings of the ACM SIGMOD Conference (1986), 311–325.
Woelk, D., Kim, W. Multimedia Information Management in an Object-Oriented Database System. Proceedings of the 13th International Conference on Very Large Data Bases (1987), 319–329.
Zdonik, S.B. Version Management in an Object-Oriented Database. Proceedings of the International Workshop on Advanced Programming Environments (1986), 405–422.
Author information
Authors and Affiliations
Editor information
Rights and permissions
Copyright information
© 1996 Springer-Verlag Berlin Heidelberg
About this paper
Cite this paper
Chen, IM.A., Markowitz, V.M., Letovsky, S., Li, P., Fasman, K.H. (1996). Version management for scientific databases. In: Apers, P., Bouzeghoub, M., Gardarin, G. (eds) Advances in Database Technology — EDBT '96. EDBT 1996. Lecture Notes in Computer Science, vol 1057. Springer, Berlin, Heidelberg. https://doi.org/10.1007/BFb0014159
Download citation
DOI: https://doi.org/10.1007/BFb0014159
Published:
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-540-61057-1
Online ISBN: 978-3-540-49943-5
eBook Packages: Springer Book Archive