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New developments in linking of biological databases and computer-generation of annotation: SWISS-PROT and its computer-annotated supplement TREMBL

  • Biological Database Technology
  • Conference paper
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Bioinformatics (GCB 1996)

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 1278))

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Abstract

SWISS-PROT is a curated protein sequence database with a high level of annotation (such as the description of the function of a protein, its domain structure, post-translational modifications, variants, etc), a minimal level of redundancy and a high level of integration with other databases.

Two major changes to SWISS-PROT were introduced with SWISS-PROT release 33 (containing 52,205 sequence entries with 18,531,384 amino acids): the linking of SWISS-PROT entries, not only to the nucleotide sequence database entries, but to the CDS level of the feature table of EMBL nucleotide sequence database entries and the introduction of a computer-annotated supplement to SWISS-PROT: TREMBL.

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Ralf Hofestädt Thomas Lengauer Markus Löffler Dietmar Schomburg

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© 1997 Springer-Verlag Berlin Heidelberg

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Apweiler, R., Junker, V., Gateau, A., O'Donovan, C., Lang, F., Bairoch, A. (1997). New developments in linking of biological databases and computer-generation of annotation: SWISS-PROT and its computer-annotated supplement TREMBL. In: Hofestädt, R., Lengauer, T., Löffler, M., Schomburg, D. (eds) Bioinformatics. GCB 1996. Lecture Notes in Computer Science, vol 1278. Springer, Berlin, Heidelberg. https://doi.org/10.1007/BFb0033202

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  • DOI: https://doi.org/10.1007/BFb0033202

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  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-63370-9

  • Online ISBN: 978-3-540-69524-0

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