Abstract
The reduced basis method successfully diminishes the required amount of degrees of freedom in the solution of a parameter dependent differential equation, and is applied in this work to the determination of the electronic structure with the Kohn-Sham equations in combination with the finite element method. It is thereby demonstrated, how the basis sizes in all-electron calculations can be essentially reduced, yielding new opportunities in the modeling of the electronic structure. In this context, a generalization of the reduced basis set construction is proposed and shown to increase the flexibility of the method.
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Abraham, F.F., Broughton, J.Q., Bernstein, N., Kaxiras, E.: Spanning the continuum to quantum length scales in a dynamic simulation of brittle fracture. EPL 44(6), 783 (1998)
Armero, F., Linder, C.: New finite elements with embedded strong discontinuities in the finite deformation range. Comput. Methods Appl. Mech. Eng. 197, 3138–3170 (2008)
Armero, F., Linder, C.: Numerical simulation of dynamic fracture using finite elements with embedded discontinuities. Int. J. Fract. 160, 119–141 (2009)
Bowler, D. R., Miyazaki, T.: \(\mathcal {O}(N)\) methods in electronic structure calculations. Rep. Prog. Phys. 75(3), 036,503 (2012)
Cancès, E., LeBris, C., Maday, Y., Turinici, G.: Towards reduced basis approaches in ab initio electronic structure computations. J. Sci. Comput. 17(1–4), 461–469 (2002)
Clementi, E.: Simple basis set for molecular wavefunctions containing first- and second-row atoms. J. Chem. Phys. 40(7), 1944–1945 (1964)
Clementi, E., Raimondi, D.L.: Atomic screening constants from SCF functions. J. Chem. Phys. 38(11), 2686–2689 (1963)
Goedecker, S.: Linear scaling electronic structure methods. Rev. Mod. Phys. 71, 1085–1123 (1999)
Hohenberg, P., Kohn, W.: Inhomogeneous electron gas. Phys. Rev. B 136, 864 (1964)
Kohn, W.: Density functional and density matrix method scaling linearly with the number of atoms. Phys. Rev. Lett. 76, 3168–3171 (1996)
Kohn, W., Sham, L.J.: Self-consistent equations including exchange and correlation effects. Phys. Rev. 140, A1133—A1138 (1965)
Lehtovaara, L., Havu, V., Puska, M.: All-electron density functional theory and time-dependent density functional theory with high-order finite elements. J. Chem. Phys. 131(5), 054103 (2009)
Linder, C., Armero, F.: Finite elements with embedded strong discontinuities for the modeling of failure in solids. Int. J. Numer. Methods Engrg. 72(12), 1391–1433 (2007)
Linder, C., Armero, F.: Finite elements with embedded branching. Finite Elem. Anal. Des. 45, 280–293 (2009)
Linder, C., Raina, A.: A strong discontinuity approach on multiple levels to model solids at failure. Comput. Methods Appl. Mech. Eng. 253, 558–583 (2013)
Linder, C., Zhang, X.: A marching cubes based failure surface propagation concept for three-dimensional finite elements with non-planar embedded strong discontinuities of higher-order kinematics. Int. J. Numer. Methods Engrg. 96, 339–372 (2013)
Linder, C., Zhang, X.: Three-dimensional finite elements with embedded strong discontinuities to model failure in electromechanical coupled materials. Comput. Methods Appl. Mech. Eng. 273, 143–160 (2014)
Maday, Y., Razafison, U.: A reduced basis method applied to the Restricted Hartree-Fock equations. C R Math 346, 243–248 (2008)
Martin, R.M.: Electronic Structure. Cambridge University Press (2004)
Moès, N., Dolbow, J., Belytschko, T.: A finite element method for crack growth without remeshing. Int. J. Numer. Methods Engrg. 46(1), 131–150 (1999)
Motamarri, P., Nowak, M.R., Leiter, K., Knap, J., Gavini, V.: Higher-order adaptive finite-element methods for Kohn-Sham density functional theory. J. Comp. Phys. 253, 308–343 (2013)
Ogata, S., Lidorikis, E., Shimojo, F., Nakano, A., Vashishta, P., Kalia, R. K.: Hybrid finite-element/molecular-dynamics/electronic-density-functional approach to materials simulations on parallel computers. Comput. Phys. Commun. 138(2), 143–154 (2001)
Parr, R.G., Yang, W.: Density-Functional Theory of Atoms and Molecules. Oxford University Press (1989)
Pask, J., Klein, B., Sterne, P., Fong, C.: Finite-element methods in electronic-structure theory. Comput. Phys. Commun. 135, 1 (2000)
Pask, J.E., Sterne, P.A.: Finite element methods in ab initio electronic structure calculations. Modell. Simul. Mater Sci. Eng. 13, R71—R96 (2005)
Patera, A.T., Rozza, G.: Reduced Basis Approximation and A Posteriori Error Estimation for Parametrized Partial Differential Equations. MIT Pappalardo, Graduate Monographs in Mechanical Engineering (2006)
Pau, G.S.H.: Reduced Basis Method for Quantum Models of Crystalline Solids. Massachusetts Institute of Technology, PhD thesis (2007)
Pau, G.S.H.: Reduced basis method for simulation of nanodevices. Phys. Rev. B 78, 155,425 (2008)
Perdew, J.P., Zunger, A.: Self-interaction correction to density-functional approximation. Phys. Rev. B 23, 5048 (1981)
Perdew, J.P., Ruzsinszky, A., Tao, J., Staroverov, V.N., Scuseria, G.E., Csonka, G.I.: Prescription for the design and selection of density functional approximations: More constraint satisfaction with fewer fits. J. Chem. Phys. 123(6), 062201 (2005)
Pulay, P.: Convergence acceleration of iterative sequences. The case of SCF iteration. Chem. Phys. Lett. 73(2), 393–398 (1980)
Saad Y.: Iterative Methods for Sparse Linear Systems. Society for Industrial and Applied Mathematics (2003)
Saad, Y., Chelikowsky, J., Shontz, S.: Numerical methods for electronic structure calculations of materials. SIAM Rev. 52(1), 3–54 (2010)
Schauer, V., Linder, C.: All-electron Kohn-Sham density functional theory on hierarchic finite element spaces. J. Comput. Phys. 250(0), 644–664 (2013)
Schuchardt, K.L., Didier, B.T., Elsethagen, T., Sun, L., Gurumoorthi, V., Chase, J., Li, J., Windus, T.L.: Basis Set Exchange: A Community Database for Computational Sciences. J Chem Inf Model 47(3), 1045–1052 (2007). pMID: 17428029
Strang G., Fix G., 2nd ed.: An Analysis of the Finite Element Method. Wellesley-Cambridge Press (1988)
Sukumar, N., Pask, J.E.: Classical and enriched finite element formulations for Bloch-periodic boundary conditions. Int. J. Numer. Methods Engrg. 77(8), 1121–1138 (2009)
Szabó, A., Ostlund N. S.: Modern Quantum Chemistry: Introduction to Advanced Electronic Structure Theory. Dover Publications (1996)
Toselli, A., Widlund, O.: Domain Decomposition Methods - Algorithms and Theory. Springer (2005)
Tsuchida, E., Tsukada, M.: Electronic-structure calculations based on the finite-element method. Phys. Rev. B 52, 5573–5578 (1995)
Van Lenthe, E., Baerends, E.J.: Optimized Slater-type basis sets for the elements 1-118. J. Comput. Chem. 24(9), 1142–1156 (2003)
Yamakawa, S., Hyodo, S.: Electronic state calculation of hydrogen in metal clusters based on Gaussian-FEM mixed basis function. J. Alloys. Compd. 356–357(0), 231–235 (2003)
Yang, C., Meza, J.C., Wang, L.W.: A constrained optimization algorithm for total energy minimization in electronic structure calculation. J. Comp. Phys. 217, 709–721 (2005)
Yang, C., Meza, J.C., Wang, L.W.: A trust region direct constrained minimization algorithm for the Kohn-Sham equation. SIAM J. Sci. Comp. 29, 1854–1875 (2007)
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Schauer, V., Linder, C. The reduced basis method in all-electron calculations with finite elements. Adv Comput Math 41, 1035–1047 (2015). https://doi.org/10.1007/s10444-014-9374-z
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DOI: https://doi.org/10.1007/s10444-014-9374-z
Keywords
- Reduced basis method
- Finite element method
- Density functional theory
- Kohn-Sham
- All-electron calculations