Abstract
Proprioceptive afferent activities recorded by a multichannel microelectrode have been used to decode limb movements to provide sensory feedback signals for closed-loop control in a functional electrical stimulation (FES) system. However, analyzing the high dimensionality of neural activity is one of the major challenges in real-time applications. This paper proposes a linear feature projection method for the real-time decoding of ankle and knee joint angles. Single-unit activity was extracted as a feature vector from proprioceptive afferent signals that were recorded from the L7 dorsal root ganglion during passive movements of ankle and knee joints. The dimensionality of this feature vector was then reduced using a linear feature projection composed of projection pursuit and negentropy maximization (PP/NEM). Finally, a time-delayed Kalman filter was used to estimate the ankle and knee joint angles. The PP/NEM approach had a better decoding performance than did other feature projection methods, and all processes were completed within the real-time constraints. These results suggested that the proposed method could be a useful decoding method to provide real-time feedback signals in closed-loop FES systems.




Similar content being viewed by others
References
Bruns, T.M., Wagenaar, J.B., Bauman, M.J., Gaunt, R.A., Weber, D.J. (2013). Real-time control of hind limb functional electrical stimulation using feedback from dorsal root ganglia recordings. Journal of Neural Engineering, 10(2), 026,020.
Chu, J.U., Song, K.I., Han, S., Lee, S.H., Kang, J.Y., Hwang, D., Suh, J.K.F., Choi, K., Youn, I. (2013). Gait phase detection from sciatic nerve recordings in functional electrical stimulation systems for foot drop correction. Physiological measurement, 34(5), 541.
Churchland, M.M., Cunningham, J.P., Kaufman, M.T., Foster, J.D., Nuyujukian, P., Ryu, S.I., Shenoy, K.V. (2012). Neural population dynamics during reaching. Nature, 487(7405), 51.
Cunningham, J.P., & Byron, M.Y. (2014). Dimensionality reduction for large-scale neural recordings. Nature neuroscience, 17(11), 1500–1509.
Cunningham, J.P., Gilja, V., Ryu, S.I., Shenoy, K.V. (2009). Methods for estimating neural firing rates, and their application to brain–machine interfaces. Neural Networks, 22(9), 1235–1246.
Gibson, S., Judy, J.W., Marković, D. (2012). Spike sorting: The first step in decoding the brain: The first step in decoding the brain. IEEE Signal processing magazine, 29(1), 124–143.
Han, S., Chu, J.U., Kim, H., Choi, K., Park, J.W., Youn, I. (2016). An unsorted spike-based pattern recognition method for real-time continuous sensory event detection from dorsal root ganglion recording. IEEE Transactions on Biomedical Engineering, 63(6), 1310–1320.
Han, S., Chu, J.U., Kim, H., Park, J.W., Youn, I. (2017). Multiunit activity-based real-time limb-state estimation from dorsal root ganglion recordings. Scientific Reports, 7, 44,197.
Holinski, B., Everaert, D., Mushahwar, V., Stein, R. (2013). Real-time control of walking using recordings from dorsal root ganglia. Journal of Neural Engineering, 10(5), 056,008.
Hyvarinen, A. (1999). Fast and robust fixed-point algorithms for independent component analysis. IEEE transactions on Neural Networks, 10(3), 626–634.
Kim, K.H., & Kim, S.J. (2003). Method for unsupervised classification of multiunit neural signal recording under low signal-to-noise ratio. IEEE Transactions on Biomedical Engineering, 50(4), 421–431.
Mushahwar, V.K., Jacobs, P.L., Normann, R.A., Triolo, R.J., Kleitman, N. (2007). New functional electrical stimulation approaches to standing and walking. Journal of Neural Engineering, 4(3), S181.
Palumbo, M., Valdes, M., Robertson, A., Sheikh, S., Lucas, P. (2004). Posterolateral intertransverse lumbar arthrodesis in the new zealand white rabbit model:: I. surgical anatomy. The Spine Journal, 4(3), 287–292.
Pregowska, A., Szczepanski, J., Wajnryb, E. (2016). Temporal code versus rate code for binary information sources. Neurocomputing, 216, 756–762.
Prochazka, A. (2015). Proprioceptor models. Encyclopedia of computational neuroscience, pp. 2501–2518.
Prochazka, A., & Ellaway, P. (2012). Sensory systems in the control of movement. Comprehensive Physiology, 2, 2615–2628.
Puigdelliv́ol-Sánchez, A., Prats-Galino, A., Ruano-Gil, D., Molander, C. (1998). Sciatic and femoral nerve sensory neurones occupy different regions of the l4 dorsal root ganglion in the adult rat. Neuroscience letters, 251(3), 169–172.
Raspopovic, S., Carpaneto, J., Udina, E., Navarro, X., Micera, S. (2010). On the identification of sensory information from mixed nerves by using single-channel cuff electrodes. Journal of neuroengineering and rehabilitation, 7(1), 17.
Rigosa, J., Weber, D., Prochazka, A., Stein, R., Micera, S. (2011). Neuro-fuzzy decoding of sensory information from ensembles of simultaneously recorded dorsal root ganglion neurons for functional electrical stimulation applications. Journal of Neural Engineering, 8(4), 046,019.
Rubin, D.B., & Thayer, D.T. (1982). Em algorithms for ml factor analysis. Psychometrika, 47(1), 69–76.
Song, K.I., Chu, J.U., Park, S.E., Hwang, D., Youn, I. (2017). Ankle-angle estimation from blind source separated afferent activity in the sciatic nerve for closed-loop functional neuromuscular stimulation system. IEEE Transactions on Biomedical Engineering, 64(4), 834–843.
Stein, R., Aoyagi, Y., Weber, D., Shoham, S., Normann, R. (2004). Encoding mechanisms for sensory neurons studied with a multielectrode array in the cat dorsal root ganglion. Canadian journal of physiology and pharmacology, 82(8-9), 757–768.
Tesfayesus, W., & Durand, D. (2007). Blind source separation of peripheral nerve recordings. Journal of neural engineering, 4(3), S157.
Wagenaar, J., Ventura, V., Weber, D. (2011). State-space decoding of primary afferent neuron firing rates. Journal of neural engineering, 8(1), 016,002.
Weber, D., Stein, R., Everaert, D., Prochazka, A. (2007). Limb-state feedback from ensembles of simultaneously recorded dorsal root ganglion neurons. Journal of Neural Engineering, 4(3), S168.
Weber, D.J., Stein, R.B., Everaert, D.G., Prochazka, A. (2006). Decoding sensory feedback from firing rates of afferent ensembles recorded in cat dorsal root ganglia in normal locomotion. IEEE Transactions on Neural Systems and Rehabilitation Engineering, 14(2), 240–243.
Wolpert, D.M., & Ghahramani, Z. (2000). Computational principles of movement neuroscience. Nature neuroscience, 3(11s), 1212.
Wu, W., Shaikhouni, A., Donoghue, J., Black, M. (2004). Closed-loop neural control of cursor motion using a kalman filter. In: Engineering in Medicine and Biology Society, 2004. IEMBS’04. 26th Annual International Conference of the IEEE, IEEE, vol. 2, pp. 4126–4129.
Yoo, P.B., & Durand, D.M. (2005). Selective recording of the canine hypoglossal nerve using a multicontact flat interface nerve electrode. IEEE Transactions on Biomedical Engineering, 52(8), 1461–1469.
Zhang, X., Yi, H., Bai, W., Tian, X. (2015). Dynamic trajectory of multiple single-unit activity during working memory task in rats. Frontiers in computational neuroscience, 9, 117.
Acknowledgements
This work was supported in part by a grant of the Next-generation Medical Device Development Program for Newly-Created Market of the National Research Foundation (NRF) funded by the Korean Government, MSIP (No. 2015M3D5A1066100), the convergence technology development program for bionic arm through the NRF funded by the Ministry of Science, ICT & Future Planning (2017M3C1B2085311), the Korea Institute of Science and Technology Institutional Program (2E27980), and the Korea University Grant.
Author information
Authors and Affiliations
Corresponding authors
Ethics declarations
Conflict of interests
The authors declare that they have no conflict of interest.
Additional information
Action Editor: Byron Yu
Sungmin Han and Jun-Uk Chu contributed equally to this work.
Rights and permissions
About this article
Cite this article
Han, S., Chu, JU., Park, J.W. et al. Linear feature projection-based real-time decoding of limb state from dorsal root ganglion recordings. J Comput Neurosci 46, 77–90 (2019). https://doi.org/10.1007/s10827-018-0686-8
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10827-018-0686-8