Skip to main content
Log in

Plant identification based on very deep convolutional neural networks

  • Published:
Multimedia Tools and Applications Aims and scope Submit manuscript

    We’re sorry, something doesn't seem to be working properly.

    Please try refreshing the page. If that doesn't work, please contact support so we can address the problem.

Abstract

Plant identification is a critical step in protecting plant diversity. However, many existing identification systems prohibitively rely on hand-crafted features for plant species identification. In this paper, a deep learning method is employed to extract discriminative features from plant images along with a linear SVM for plant identification. To offer a self-learning feature representation for different plant organs, we choose a very deep convolutional neural networks (CNNs), which consists of sixteen convolutional layers followed by three Fully-Connected (FC) layers and a final soft-max layer. Five max-pooling layers are performed over a 2×2 pixel window with stride 2. Extensive experiments on several plant datasets demonstrate the remarkable performance of the very deep neural network compared to the hand-crafted features.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7
Fig. 8

Similar content being viewed by others

References

  1. Nguyen QK, Le TL, Pham NH (2013) Leaf based plant identification system for android using surf features in combination with bag of words model and supervised learning. In: Proceedings of international conference on advanced technologies for communications, pp 404–407

  2. Ahmed N, Ghani U, Asif S (2016) An automatic leaf based plant identification system. In: Proceedings of the 5th international multidisciplinary conference, pp 29–31

  3. Arora A, Gupta A, Bagmar N, Mishra S, Bhattacharya A (2012) A plant identification system using shape and morphological features on segmented leaflets. CLEF

  4. Barré P, Stöver BC, Müller KF, Steinhage V (2017) A computer vision system for automatic plant species identification. Ecological Informatics 40:50–56

    Article  Google Scholar 

  5. Belhumeur PN, Chen D, Feiner S, Jacobs D, Kress W, Ling H, Lopez I, Ramamoorthi R, Sheorey S, White S, Zhang L (2008) Searching the world’s herbaria: A system for visual identification of plant species. In: Proceedings of 10th european conference on computer vision, vol 4, pp 116–129

  6. Bo L, Ren X, Fox D (2013) Multipath sparse coding using hierarchical matching pursuit. In: Proceedings of IEEE conference on computer vision and pattern recognition, pp 660–667

  7. Boureau Y-L, Bach F, LeCun Y, Ponce J (2010) Learning mid-level features for recognition. In: Proceedings of IEEE conference on computer vision and pattern recognition, pp 2559–2566

  8. Caballero C, Aranda MC (2010) Plant species identification using leaf image retrieval. In: Proceedings of the ACM international conference on image and video retrieval, pp 327–334

  9. Chaki J, Parekh R (2011) Plant leaf recognition using shape based features and neural network classifiers. Int J Adv Comput Sci Appl 2(10):41–47

    Google Scholar 

  10. Chopra M (2015) Treeid: An image recognition system for plant species identification. Report in cs231n of Stanford University

  11. Cortes C, Vapnik V (1995) Support-vector networks. Mach Learn 20:273–297

    MATH  Google Scholar 

  12. Donahue J, Jia Y, Vinyals O, Hoffman J, Zhang N, Tzeng E, Darrell T (2014) Decaf: A deep convolutional activation feature for generic visual recognition. In: Proceedings of the 31st international conference on machine learning, vol 32, pp 647–655

  13. Du J-X, Wang X-F, Zhang G-J (2007) Leaf shape based plant species recognition. Appl Math Comput 185(2):883–893

    MATH  Google Scholar 

  14. Zeiler MD, Taylor GW, Fergus R (2011) Adaptive deconvolutional networks for mid and high level feature learning. In: Proceedings of IEEE international conference on computer vision, pp 2018–2025

  15. Fiel S, Sablatnig R (2011) Automated identification of tree species from images of the bark, leaves and needles. In: Proceedings of 16th computer vision winter workshop

  16. Goau H, Bonnet P, Barbe J, Bakic V, Joly A, Molino J-F, Barthelemy D, Boujemaa N (2012) Multi-organ plant identification. In: Proceedings of the 1st ACM international workshop on Multimedia analysis for ecological data, pp 41–44

  17. Goau H, Bonnet P, Joly A (2015) Lifeclef plant identification task 2015. CLEF

  18. Goau H, Bonnet P, Joly A (2016) Plant identi cation in an open-world (lifeclef 2016). In: Proceedings of conference and labs of the evaluation forum, pp 428–439

  19. Guo Y, Ding G, Han J, Gao Y (2017) Zero-shot learning with transferred samples. IEEE Trans Image Process 26(7):3277–3290

    Article  MathSciNet  Google Scholar 

  20. Guo Y, Ding G, Li L, Han J, Shao L (2017) Learning to hash with optimized anchor embedding for scalable retrieval. IEEE Trans Image Process 26 (3):1344–1354

    Article  MathSciNet  Google Scholar 

  21. Guru DS, Sharath Kumar YH, Shantharamu M (2010) Texture features and knn in classification of flower images. Recent Trends in Image Processing and Pattern Recognition 37(1):21–29

    Google Scholar 

  22. Hsiao J-K, Kang L-W, Chang C-L, Hsu C-Y, Chen C-Y (2014) Learning sparse representation for leaf image recognition. In: Proceedings of IEEE conference on consumer electronics, pp 209–210

  23. Hsiao J-K, Kang L-W, Chang CL, Lin CY (2014) Comparative study of leaf image recognition with a novel learning-based approach. In: Proceedings of science and information conference, pp 389–393

  24. Jiang F, Zhang S, Wu S, Gao Y, Zhao D (2015) Multi-layered gesture recognition with kinect. J Mach Learn Res 16:227–254

    MathSciNet  MATH  Google Scholar 

  25. Kim S-J, Kim B-W, Kim D-P (2011) Tree recognition for landscape using by combination of features of its leaf, flower and bark. In: Proceedings of SICE annual conference, pp 1147–1151

  26. Krizhevsky A, Sutskever I, Hinton GE (2017) Imagenet classification with deep convolutional neural networks. Commun ACM 60(6):84–90

    Article  Google Scholar 

  27. Kulkarni T, Uke NJ (2014) Implementation of image based flower classification system. International Journal of Computer Science and Business Informatics 13(1):35–44

    Google Scholar 

  28. Kumar N, Belhumeur PN, Biswas A, Jacobs DW, Kress WJ, Lopez IC, Soares JVB (2012) Leafsnap: A computer vision system for automatic plant species identification. In: Proceedings of European Conference on Computer Vision, pp 502–516

    Chapter  Google Scholar 

  29. Kumar TP, Veera Prasad Reddy M, Bora PK (2016) Leaf identification using shape and texture features. In: Proceedings of international conference on computer vision and image processing, vol 460, pp 531–541

  30. Kumar TP, Veera Prasad Reddy M, Bora PK (2017) Leaf identification using shape and texture features. In: Proceedings of international conference on computer vision and image processing, pp 531–541

  31. Lazebnik S, Schmid C, Ponce J (2006) Beyond bags of features: Spatial pyramid matching for recognizing natural scene categories, vol 2, pp 2169–2178

  32. Lee H, Grosse R, Ranganath R, Ng AY (2009) Convolutional deep belief networks for scalable unsupervised learning of hierarchical representations. In: Proceedings of the 26th annual international conference on machine learning, pp 609–616

  33. Lee K-B, Hong K-S (2013) An implementation of leaf recognition system using leaf vein and shape. International Journal of Bio-Science and Bio-Technology 5(2):57–66

    Article  Google Scholar 

  34. Lee SH, Chan CS, Wilkin P, Remagnino P (2015) Deep-plant: Plant identification with convolutional neural networks. In: Proceedings of IEEE international conference on image processing, pp 452–456

  35. Lin Z, Ding G, Han J, Wang J (2017) Cross-view retrieval via probability-based semantics-preserving hashing. IEEE Transactions on Cybernetics 47(12):4342–4355

    Article  Google Scholar 

  36. Liu Q, Lu X, He Z, Zhang C, Chen W-S (2017) Deep convolutional neural networks for thermal infrared object tracking. Knowl-Based Syst 134:189–198

    Article  Google Scholar 

  37. Lowe DG (2004) Distinctive image features from scale-invariant keypoints. Int J Comput Vis 60(2):91–110

    Article  MathSciNet  Google Scholar 

  38. Ma L-H, Zhao Z-Q, Wang J (2013) Apleafis: an android-based plant leaf identification system. In: Proceedings of intelligent computing theories, pp 106–111

    Chapter  Google Scholar 

  39. Mabrouk AB, Najjar A, Zagrouba E (2014) Image flower recognition based on a new method for color feature extraction. In: Proceedings of the 9th international conference on computer vision theory and applications, vol 2, pp 201–206

  40. Metre V, Ghorpade J (2013) An overview of the research on texture based plant leaf classification. International Journal of Computer Science and Network 2(3):25–36

    Google Scholar 

  41. Mouine S, Yahiaoui I, Verroust-Blondet A (2012) Advanced shape context for plant species identification using leaf image retrieval. In: Proceedings of the 2nd ACM international conference on multimedia retrieval

  42. Mouine S, Yahiaoui I, Verroust-Blondet A, Joyeux L, Selmi S, Goau H (2013) An android application for leaf-based plant identification. In: Proceedings of the 3rd ACM conference on International conference on multimedia retrieval, pp 309–310

  43. Nilsback M-E, Zisserman A (2008) Automated flower classification over a large number of classes. In: Proceedings of indian conference on computer vision, graphics and image processing, pp 722–729

  44. Pallavi P, Veena Devi VS (2014) Leaf recognition based on feature extraction and zernike moments. In: Proceedings of international conference on advances in computer & communication engineering, vol 2, pp 67–73

  45. Patel HN, Jain RK, Joshi MV (2011) Fruit detection using improved multiple features based algorithm. Int J Comput Appl 13(2):1–5

    Google Scholar 

  46. Qi Y, Zhang S, Qin L, Yao H, Huang Q, Lim J, Yang M-H Hedging deep features for visual tracking. IEEE Trans. on Pattern Analysis and Machine Intelligence. In Press

  47. Ren X-M, Wang X-F, Zhao Y (2012) An efficient multi-scale overlapped block lbp approach for leaf image recognition. In: Proceedings of the 8th international conference on intelligent computing theories and applications, pp 237–243

  48. Satti V, Satya A, Sharma S (2013) An automatic leaf recognition system for plant identification using machine vision technology. International Journal of Engineering Science and Technology 5(4):874– 879

    Google Scholar 

  49. Simonyan K, Zisserman A (2014) Very deep convolutional networks for large-scale image recognition. In: Proceedings of computer vision and pattern recognition

  50. Singh K, Gupta I, Gupta S (2010) Svm-bdt pnn and fourier moment technique for of leaf shape. International journal of signal processing, Image Processing and Pattern Recognition 3(4):67–78

    Google Scholar 

  51. Sünderhauf N, McCool C, Upcroft B, Perez T (2014) Fine-grained plant classification using convolutional neural networks for feature extraction. CLEF

  52. Sun B-Y, Huang D-S, Guo L, Zhao Z-Q (2004) Support vector machine committee for classification. In: Proceedings of international symposium on neural networks, pp 648–653

  53. Tsolakidis DG, Kosmopoulos DI, Papadourakis G (2014) Plant leaf recognition using zernike moments and histogram of oriented gradients. In: Proceedings of artificial intelligence: methods and applications, pp 406–417

    Chapter  Google Scholar 

  54. Wang J, Yang J, Yu K, Lv F, Huang T, Gong Y (2010) Locality-constrained linear coding for image classification. In: Proceedings of IEEE conference on computer vision and pattern recognition, pp 3360–3367

  55. Wang X, Huang D-S, Du J-X, Xu H, Heutte L (2008) Classification of plant leaf images with complicated background. Appl Math Comput 205(2):916–926

    MathSciNet  MATH  Google Scholar 

  56. Wang Z, Chi Z, Feng D (2003) Shape based leaf image retrieval. IEE Proceedings on Vision, Image and Signal Processing 150(1):34–43

    Article  Google Scholar 

  57. Wang Z, Lu B, Chi Z, Feng D (2011) Leaf image classification with shape context and sift descriptors. In: Proceedings of international conference on digital image computing: techniques and applications, pp 650–654

  58. Wilf P, Zhang S, Chikkerur S, Little SA, Wing SL, Serre T (2016) Computer vision cracks the leaf code. Proc Natl Acad Sci USA 113(12):3305–3310

    Article  Google Scholar 

  59. Xiao X-Y, Hu R, Zhang S-W, Wang X-F (2010) Hog-based approach for leaf classification. In: Proceedings of lecture notes in computer science, vol 6216, pp 149–155

    Google Scholar 

  60. Song Y, Glasbey CA, Horgan GW, Polder G, Dieleman JA, Van der Heijden GWAM (2014) Automatic fruit recognition and counting from multiple images. Biosyst Eng 118(1):203–215

    Article  Google Scholar 

  61. Yang J, Yu K, Gong Y, Huang T (2009) Linear spatial pyramid matching using sparse coding for image classification. In: Proceedings of IEEE conference on computer vision and pattern recognition, pp 1794–1801

  62. Zeiler MD, Fergus R (2014) Visualizing and understanding convolutional networks. In: Proceedings of european conference on computer vision, pp 818–833

    Google Scholar 

  63. Zhang B, Yang Y, Chen C, Yang L, Han J, Shao L (2017) Action recognition using 3d histograms of texture and a multi-class boosting classifier. IEEE Trans Image Process 26(10):4648–4660

    Article  MathSciNet  Google Scholar 

  64. Zhang C, Zhou P, Li C, Liu L (2015) A convolutional neural network for leaves recognition using data augmentation. In: Proceedings of IEEE international conference on computer and information technology, pp 2143–2150

  65. Zhang S, Lan X, Qi Y, Yuen PC (2017) Robust visual tracking via basis matching. IEEE Trans Circuits and Systems for Video Technology 27(3):421–430

    Article  Google Scholar 

  66. Zhang S, Lan X, Yao H, Zhou H, Tao D, Li X (2017) A biologically inspired appearance model for robust visual tracking. IEEE Trans Neural Networks and Learning Systems 28(10):2357–2370

    Article  MathSciNet  Google Scholar 

  67. Zhang S, Qi Y, Jiang F, Lan X, Yuen PC, Zhou H Point-to-set distance metric learning on deep representations for visual tracking. IEEE Trans. on Intelligent Transportation Systems. https://doi.org/10.1109/TITS.2017.2766093

    Article  Google Scholar 

  68. Zhang S, Zhou H, Jiang F, Li X (2015) Robust visual tracking using structurally random projection and weighted least squares. IEEE Transactions on Circuits and Systems for Video Technology 25(11):1749–1760

    Article  Google Scholar 

  69. Zhao C, Chan SSF, Cham W-K, Chu LM (2015) Plant identification using leaf shapes - a pattern counting approach. Pattern Recogn 48(10):3203–3215

    Article  Google Scholar 

  70. Zhao Z, Huang X, Yang G (2015) Plant recognition based on leaf and bark images. Journal of Computational Information Systems 11(3):857–864

    Google Scholar 

  71. Zhao Z-Q, Xie B-J, Cheung YM, Wu X (2014) Plant leaf identification via a growing convolution neural network with progressive sample learning. In: Proceedings of asian conference on computer vision, vol 2, pp 348–361

    Google Scholar 

  72. Zhu H, Huang X, Zhang S, Yuen PC (2017) Plant identification via multipath sparse coding. Multimedia Tools and Applications 76(3):4599–4615

    Article  Google Scholar 

Download references

Acknowledgments

This work is supported by the key R&D program of Yantai City (No. 2016YT06000609).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Shengping Zhang.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Zhu, H., Liu, Q., Qi, Y. et al. Plant identification based on very deep convolutional neural networks. Multimed Tools Appl 77, 29779–29797 (2018). https://doi.org/10.1007/s11042-017-5578-9

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11042-017-5578-9

Keywords

Navigation