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SMFDNet: spatial and multi-frequency domain network for OCT angiography retinal vessel segmentation

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Abstract

Optical coherence tomography angiography (OCTA) is a non-invasive imaging technique, and automatic segmentation of retinal vessels is crucial for understanding ocular diseases and making informed clinical decisions. However, the automatic segmentation of retinal vessels in OCTA images is particularly challenging due to several inherent issues. Retinal vessels often exhibit low contrast against the surrounding tissue, making it difficult to distinguish them clearly. Additionally, the complex and irregular branching structures of retinal vessels, along with the presence of noise and artefacts in OCTA images, further complicate the segmentation task. To address these challenges, we propose a novel method, the spatial and multi-frequency domain-based segmentation network (SMFDNet), specifically designed for vessel segmentation in OCTA fundus images. This network effectively combines spatial and multi-frequency domain features to enhance the segmentation accuracy of retinal vessels. To demonstrate the superiority of our proposed network, we conduct experiments on the Retinal Vessels Images in OCTA (REVIO), Retinal OCT-Angiography Vessel Segmentation (ROSE) and Optical Coherence Tomography Angiography-500 (OCTA-500) datasets. The extensive experimental results show that our approach consistently outperforms state-of-the-art methods, particularly in handling low contrast and complex vessel structures. The codes are available at https://kyanbis.github.io/SMFDNet/.

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Data Availability

No datasets were generated or analysed during the current study.

References

  1. Zhou SK, Greenspan H, Davatzikos C, Duncan SJ, Ginneken BV, Madabhushi A, Prince JL, Rueckert D, Summers MR (2021) A review of deep learning in medical imaging: Imaging traits, technology trends, case studies with progress highlights, and future promises. Proc IEEE 109(5):820–838. https://doi.org/10.1109/JPROC.2021.3054390

    Article  Google Scholar 

  2. Li MC, Chen YR, Ji ZX, Xie KR, Yuan ST, Chen Q, Li S (2020) Image projection network: 3D to 2D image segmentation in OCTA images. IEEE Trans Med Imaging 39(11):3343–3354. https://doi.org/10.1109/tmi.2020.2992244

    Article  MATH  Google Scholar 

  3. Dong BJ, Wang XD, Xie Q, Du F, Gao L, Wu QY, Cao GH, Dai CS (2022) A multi-branch convolutional neural network for screening and staging of diabetic retinopathy based on wide-field optical coherence tomography angiography. IRBM 43(6):614–620. https://doi.org/10.1016/j.irbm.2022.04.004

    Article  Google Scholar 

  4. Ma YH, Hao HY, Xie JY, Fu HZ, Zhang J, Yang JL, Wang Z, Liu J, Zheng YL, Zhao Y, Rose T (2021) A retinal OCT-angiography vessel segmentation dataset and new model. IEEE Trans Med Imaging 40(3):928–939. https://doi.org/10.1109/tmi.2020.3042802

    Article  MATH  Google Scholar 

  5. Li MC, Huang K, Xu QZ, Yang JD, Zhang YH, Ji ZX, Xie KR, Yuan ST, Liu QH, Chen Q (2024) OCTA-500: a retinal dataset for optical coherence tomography angiography study. Med Image Anal 93:103092–103092. https://doi.org/10.1016/j.media.2024.103092

    Article  Google Scholar 

  6. Lns I, Wang JC, Cui Y, Katz R, Vingopoulos F, Staurenghi G, Vavvas DG, Miller JW, Miller JB (2021) Retinal applications of swept source optical coherence tomography (OCT) and optical coherence tomography angiography (OCTA). Prog Retin Eye Res 84:100951–100951. https://doi.org/10.1016/j.preteyeres.2021.100951

    Article  Google Scholar 

  7. Carlo TE et al (2015) A review of optical coherence tomography angiography (OCTA). Int J Retina Vitreous 1(1):5–5. https://doi.org/10.1186/s40942-015-0005-8

    Article  MATH  Google Scholar 

  8. Minaee S, Boykov Y, Porikli F, Plaza A, Kehtarnavaz N, Terzopoulos D (2022) Image segmentation using deep learning: a survey. IEEE Trans Pattern Anal Mach Intell 44(7):3523–3542. https://doi.org/10.1109/TPAMI.2021.3059968

    Article  Google Scholar 

  9. Ronneberger O, Fischer P, Brox T (2015) Convolutional Networks for Biomedical Image Segmentation. Medical Image U-Net Comput Comput Assisted Interv 9351:234–241. https://doi.org/10.1007/978-3-319-24574-4_28

    Article  MATH  Google Scholar 

  10. Zhang T, Deng L, Huang T, Chanussot J, Vivone G (2023) A triple-double convolutional neural network for panchromatic sharpening. IEEE Trans Neural Networks Learning Syst 34(11):9088–9101. https://doi.org/10.1109/tnnls.2022.3155655

    Article  MATH  Google Scholar 

  11. Wang Y, Wu H, Zhang J, Gao Z, Wang J, Yu PS, Long M (2023) PredRNN: A Recurrent Neural Network for Spatiotemporal Predictive Learning. IEEE Trans Pattern Anal Mach Intell 45(2):2208–2225. https://doi.org/10.1109/TPAMI.2022.3165153

    Article  MATH  Google Scholar 

  12. Hassini K, Khalis S, Habibi O, Chemmakha M, Lazaar M (2024) An end-to-end learning approach for enhancing intrusion detection in Industrial-Internet of Things. Knowledge-based Syst. https://doi.org/10.1016/j.knosys.2024.111785

    Article  Google Scholar 

  13. Juneja M, Minhas JS, Singla N, Thakur S, Thakur N, Jindal P (2022) Fused framework for glaucoma diagnosis using Optical Coherence Tomography (OCT) images. Expert Syst Appl 201:117202. https://doi.org/10.1016/j.eswa.2022.117202

    Article  Google Scholar 

  14. Bayhaqi YA, Hamidi A, Canbaz F, Navarini AA, Cattin PC, Zam A (2022) Deep-learning-based fast optical coherence tomography (OCT) image denoising for smart laser osteotomy. IEEE Trans Med Imaging 41(10):2615–2628. https://doi.org/10.1109/TMI.2022.3168793

    Article  Google Scholar 

  15. He X, Fang L, Tan M, Chen X (2022) Intra- and inter-slice contrastive learning for point supervised OCT fluid segmentation. IEEE Trans Image Process 31(1):1870–1881. https://doi.org/10.1109/TIP.2022.3148814

    Article  MATH  Google Scholar 

  16. Dong W, Du Y, Xu J, Dong F, Ren S (2022) Spatially adaptive blind deconvolution methods for optical coherence tomography. Comput Biol Med 147:105650. https://doi.org/10.1016/j.compbiomed.2022.105650

    Article  MATH  Google Scholar 

  17. Garca G, Colomer A, Naranjo V (2021) Glaucoma detection from raw Sd-Oct volumes: a novel approach focused on spatial dependencies. Comput Methods Programs Biomed 200:105855. https://doi.org/10.1016/j.cmpb.2020.105855

    Article  Google Scholar 

  18. Xu YX, Han K, Xu C, Tang Y, Xu C, Wang Y (2021) Learning Frequency Domain Approximation for Binary Neural Networks. Computing Research Repository, 25553–25565

  19. Cheng H, Yang S, Zhou TY, Guo L, Wen B (2023) Frequency guidance matters in few-shot learning. IEEE Int Conf Comput Vision. https://doi.org/10.1109/iccv51070.2023.01085

    Article  MATH  Google Scholar 

  20. Amato A, Nadin F, Borghesan F (2020) Widefield optical coherence tomography angiography in diabetic retinopathy. J Diabetes Res. https://doi.org/10.1155/2020/8855709

    Article  MATH  Google Scholar 

  21. Mistelbauer G, Morar A, Schernthaner R, Strassl A, Fleischmann D, Moldoveanu F, Grller ME (2021) Semi-automatic vessel detection for challenging cases of peripheral arterial disease. Comput Biol Med 133:104344. https://doi.org/10.1016/j.compbiomed.2021.104344

    Article  Google Scholar 

  22. Su R, Sluijs MVD, Cornelissen SAP, Lycklama G, Hofmeijer J, Majoie CBL, Doormaal PJ, Es AC, Ruijters D, Niessen WJ, Lugt A, Walsum T (2022) Spatio-temporal deep learning for automatic detection of intracranial vessel perforation in digital subtraction angiography during endovascular thrombectomy. Med Image Anal 77:102377. https://doi.org/10.1016/j.media.2022.102377

    Article  Google Scholar 

  23. Long J, Shelhamer E, Darrell T (2015) Fully convolutional networks for semantic segmentation. IEEE Trans Pattern Analy Machine Intell. https://doi.org/10.1109/TPAMI.2016.2572683

    Article  MATH  Google Scholar 

  24. Cao G, Peng Z, Zhou Z, Wu Y, Zhang Y, Yan R (2024) Multi-task OCTA image segmentation with innovative dimension compression. Pattern Recogn. https://doi.org/10.1016/j.patcog.2024.111123

    Article  MATH  Google Scholar 

  25. Gu Z, Cheng J, Fu H, Zhou K, Hao H, Zhao Y, Zhang T, Gao S, Liu J (2019) CE-Net: context encoder network for 2D medical image segmentation. IEEE Trans Med Imaging 38(10):2281–2292. https://doi.org/10.1109/TMI.2019.2903562

    Article  Google Scholar 

  26. Zhou Z, Siddiquee MMR, Tajbakhsh N, Liang J (2018) Unet plus plus: a nested U-net architecture for medical image segmentation. Lect Notes Comput Sci 11045:3–11. https://doi.org/10.1007/978-3-030-00889-5_1

    Article  Google Scholar 

  27. Liu X, Wang S, Zhang Y, Liu D, Hu W (2021) Automatic fluid segmentation in retinal optical coherence tomography images using attention based deep learning. Neurocomputing 452:576–591. https://doi.org/10.1016/j.neucom.2020.07.143

    Article  MATH  Google Scholar 

  28. Fan Z, Liu Y, Xia M, Hou J, Yan F, Zang Q (2023) ResAt-UNet: a U-Shaped network using ResNet and attention module for image segmentation of urban buildings. IEEE J Select Topics Appl Earth Observ Remote Sens 16:2094–2111. https://doi.org/10.1109/jstars.2023.3238720

    Article  Google Scholar 

  29. Etiner H, Metlek S (2023) DenseUNet+: a novel hybrid segmentation approach based on multi-modality images for brain tumor segmentation. J King Saud Univ Comput Inf Sci 35(8):101663–101663. https://doi.org/10.1016/j.jksuci.2023.101663

    Article  Google Scholar 

  30. Wang M et al (2022) MsTGANet: automatic drusen segmentation from retinal OCT images. IEEE Trans Med Imaging 41(2):394–406. https://doi.org/10.1109/tmi.2021.3112716

    Article  MATH  Google Scholar 

  31. Xie E, Wang W, Yu Z, Anandkumar A, Luo Alvarez Jp (2021) SegFormer: simple and efficient design for semantic segmentation with transformers. Comput Res Repository. https://doi.org/10.48550/arxiv.2105.15203

    Article  Google Scholar 

  32. Chen Y, Lu Q, Yu X, Luo E, Adeli Y, Wang L, Lu Yuille A, Zhou Y (2021) Transunet: Transformers make strong encoders for medical image segmentation, arXiv preprint arXiv:2102.04306, https://doi.org/10.48550/arxiv.2102.04306

  33. Tan X, Chen X, Meng Q, Shi F, Xiang D, Chen Z, Pan L, Zhu W (2023) OCT2Former: a retinal OCT-angiography vessel segmentation transformer. Comput Methods Programs Biomed. https://doi.org/10.1016/j.cmpb.2023.107454

    Article  MATH  Google Scholar 

  34. Lowell J, Hunter A, Steel D, Basu A, Ryder R, Fletcher E, Kennedy L (2004) Optic nerve head segmentation. IEEE Trans Med Imaging 23:256–264. https://doi.org/10.1109/TMI.2003.823261

    Article  Google Scholar 

  35. Staal J, Abrmoff MD, Niemeijer M, Viergever MA, Ginneken BV (2004) Ridge-based vessel segmentation in color images of the retina. IEEE Trans Med Imaging 23:501–509. https://doi.org/10.1109/TMI.2004.825627

    Article  Google Scholar 

  36. Porwal P, Pachade S, Kamble R, Kokare M, Deshmukh G, Sahasrabuddhe V, Meriaudeau F (2018) Indian diabetic retinopathy image dataset (Idrid): a database for diabetic retinopathy. Screen Res Data 3:25. https://doi.org/10.3390/data3030025

    Article  Google Scholar 

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Acknowledgements

The authors would like to thank the editors and anonymous reviewers for their constructive comments and suggestions.

Funding

This work was supported by the Natural Science Foundation of Shandong Province (No. ZR2020MF105), Guangdong Provincial Key Laboratory of Biomedical Optical Imaging Technology (No. 2020B121201010), the Natural National Science Foundation of China (Nos. 62175156 and 61675134) and Qufu Normal University Foundation for High Level Research (No. 116-607001).

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Authors

Contributions

Conception and design were performed by S.L. and F.M.; (II) administrative support was provided by F. M. and J.M.; (III) provision of study materials or patients was distributed by J.M. and Y.F.; (IV) collection and assembly of data were carried out by F. M.; (V) data analysis and interpretation were conducted by S.L., Y.G., H.L. and R.C.; (VI) manuscript writing was done by all authors; (VII) final approval of manuscript was approved by all authors.

Corresponding author

Correspondence to Fei Ma.

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Li, S., Ma, F., Yan, F. et al. SMFDNet: spatial and multi-frequency domain network for OCT angiography retinal vessel segmentation. J Supercomput 81, 535 (2025). https://doi.org/10.1007/s11227-025-06985-6

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