Abstract
To address the incomplete problem in pulmonary parenchyma segmentation based on the traditional methods, a novel automated segmentation method based on an eight-neighbor region growing algorithm with left-right scanning and four-corner rotating and scanning is proposed in this paper. The proposed method consists of four main stages: image binarization, rough segmentation of lung, image denoising and lung contour refining. First, the binarization of images is done and the regions of interest are extracted. After that, the rough segmentation of lung is performed through a general region growing method. Then the improved eight-neighbor region growing is used to remove noise for the upper, middle, and bottom region of lung. Finally, corrosion and expansion operations are utilized to smooth the lung boundary. The proposed method was validated on chest positron emission tomography-computed tomography (PET-CT) data of 30 cases from a hospital in Shanxi, China. Experimental results show that our method can achieve an average volume overlap ratio of 96.21 ± 0.39% with the manual segmentation results. Compared with the existing methods, the proposed algorithm segments the lung in PET-CT images more efficiently and accurately.
Similar content being viewed by others
References
Center M, Siegel R, Jemal A. Global Cancer Facts & Figures. 2nd ed. Atlanta: American Cancer Society, 2011
McNitt-Gray M. Lung nodules and beyond: approaches, challenges and opportunities in thoracic CAD. In: Proceedings of the 18th International Congress and Exhibition on Computer Assisted Radiology and Surgery. 2004, 896–901
Ko J P, Naidich D. Lung nodule detection and characterization with multislice CT. Radiologic Clinics of North America, 2003, 41(3): 575–597
Hu S, Hoffman E A, Reinhardt J M. Automatic lung segmentation for accurate quantitation of volumetric X-ray CT images. IEEE Transactions on Medical Imaging, 2001, 20(6): 490–498
Armato S G, MacMahon H. Automated lung segmentation and computer-aided diagnosis for thoracic CT scans. In: Proceedings of the 17th International Congress and Exhibition on Computer Assisted Radiology and Surgery. 2003, 1256: 977–982
Armato S G, Sensakovic W F. Automated lung segmentation for thoracic CT: impact on computer-aided diagnosis1. Academic Radiology, 2004, 11(9): 1011–1021
Denison D M, Morgan M D, Millar A B. Estimation of regional gas and tissue volumes of the lung in supine man using computed tomography. Thorax, 1986, 41(8): 620–628
Kalender W A, Fichte H, Bautz W, Skalej M. Semiautomatic evaluation procedures for quantitative CT of the lung. Journal of Computer Assisted Tomography, 1991, 15(2): 248–255
Sun X, Zhang H, Duan H. 3D computerized segmentation of lung volume with computed tomography. Academic Radiology, 2006, 13(6): 670–677
Pu J, Roos J, Chin A Y, Napel S, Rubin G D, Paik D S. Adaptive border marching algorithm: automatic lung segmentation on chest CT images. Computerized Medical Imaging and Graphics, 2008, 32(6): 452–462
van Rikxoort E M, de Hoop B, Viergever M A, Prokop M, Ginneken B V. Automatic lung segmentation from thoracic computed tomography scans using a hybrid approach with error detection. Medical Physics, 2009, 36(7): 2934–2947
d Silva A F, Silva J S, Santos B S, Ferreira C. Fast pulmonary contour extraction in X-ray CT images: a methodology and quality assessment. In: Proceedings of SPIE, 2001, 4321: 216–224
Ukil S, Reinhardt J M. Smoothing lung segmentation surfaces in 3D X-ray CT images using anatomic guidance. In: Proceedings of SPIE. 2004, 1066–1075
Dajnowiec M, Alirezaie J. Computer simulation for segmentation of lung nodules in CT images. In: Proceedings of IEEE International Conference on Systems, Man and Cybernetics, 2004, 4491–4496
Lai J, Wei Q. Automatic lung fields segmentation in CT scans using morphological operation and anatomical information. Bio-medical Materials and Engineering, 2014, 24(1): 335–340
Korfiatis P, Skiadopoulos S, Sakellaropoulos P, Kalogeropoulou C, Costaridou L. Combining 2D wavelet edge highlighting and 3D thresholding for lung segmentation in thin-slice CT. The British Journal of Radiology, 2014, 80(960): 996–1004
Choi W J, Choi T S. Automated pulmonary nodule detection based on three-dimensional shape-based feature descriptor. Computer Methods and Programs in Biomedicine, 2014, 113(1): 37–54
Stathis P, Kavallieratou E, Papamarkos N. An evaluation technique for binarization algorithms. Journal of Universal Computer Science, 2008, 14(18): 3011–3030
Zheng Y, Sarem M. A novel binary image representation algorithm by using NAM and coordinate encoding procedure and its application to area calculation. Frontiers of Computer Science, 2014, 8(5): 763–772
Song H, Zhao Q, Liu Y. Splitting touching cells based on concave-point and improved watershed algorithms. Frontiers of Computer Science, 2014, 8(1): 156–162
Kefali A, Sari T, Sellami M. Evaluation of several binarization techniques for old Arabic documents images. In: Proceedings of the 1st International Symposium on Modeling and Implementing Complex Systems. 2010, 88–99
Ridler TW, Calvard S. Picture thresholding using an iterative selection method. IEEE Transactions on Systems, Man and Cybernetics, 1978, 8(8): 630–632
Trussell H J. Comments on “picture thresholding using an iterative selection method”. IEEE Transactions on Systems, Man and Cybernetics, 1979, 9(5): 311
Adams R, Bischof L. Seeded region growing. IEEE Transactions on Pattern Analysis and Machine Intelligence, 1994, 16(6): 641–647
Delibasis K S, Matsopoulos G K, Mouravliansky N A, Nikita K S. A novel and efficient implementation of the marching cubes algorithm. Computerized Medical Imaging and Graphics, 2001, 25(4): 343–352
Xie F, Bovik A C. Automatic segmentation of dermoscopy images using self-generating neural networks seeded by genetic algorithm. Pattern Recognition, 2013, 46(3): 1012–1019
Yim Y, Hong H. Correction of segmented lung boundary for inclusion of pleural nodules and pulmonary vessels in chest CT images. Computers in Biology and Medicine, 2008, 38(8): 845–857
Author information
Authors and Affiliations
Corresponding author
Additional information
Juanjuan Zhao is an associate professor in the School of Computer Science and Technology at Taiyuan University of Technology (TYUT), China. She received her PhD in computer application technology from TYUT in 2010. Her current research interests are medical image processing and the Internet of Things.
Guohua Ji received her BS in Computer Science and Technology from the China University of Mining and Technology, China in 2013. She is currently pursuing her MD in the area of image processing at Taiyuan University of Technology, China.
Xiaohong Han received her PhD in Computer Science from Taiyuan University of Technology (TYUT), China in 2013. She is currently a lecturer at the Key Laboratory of Advanced Transducers and Intelligent Control Systems in TYUT. Her research interests are optimization, chaotic signal processing, noise reduction, digital filtering and feature selection.
Yan Qiang received his PhD in Computer Application Technology from Taiyuan University of Technology (TYUT), China in 2010. He is a professor at the School of Computer Science and Technology at TYUT. His current research topics include image processing and cloud computing.
Xiaolei Liao received his BS in Computer Science and Technology from the Taiyuan University of Technology (TYUT), China in 2014. He is currently pursuing his MS in the area of medical image processing at TYUT.
Rights and permissions
About this article
Cite this article
Zhao, J., Ji, G., Han, X. et al. An automated pulmonary parenchyma segmentation method based on an improved region growing algorithmin PET-CT imaging. Front. Comput. Sci. 10, 189–200 (2016). https://doi.org/10.1007/s11704-015-4543-x
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s11704-015-4543-x