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On biological individuation

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Abstract

In this paper, we understand the emergence of life as a pure individuation process. Individuation already occurs in open thermodynamics systems near equilibrium. We understand such open systems, as already recursively characterized (R1) by the relation between their internal properties, and their boundary conditions. Second, global properties emerge in such physical systems. We interpret this change as the fact that their structure is the recursive result of their operations (R2). We propose a simulation of the emergence of life in Earth by a mapping (R) through which (R1R2) operators are applied to themselves, so that RN = (R1R2)N. We suggest that under specific thermodynamic (open systems out of equilibrium) and chemical conditions (autocatalysis, kinetic dynamic stability), this mapping can go up to a limit characterized by a fixed-point equation: \(R = \phi_{1} \phi_{2} \ R\). In this equation, (\( \phi_{1} \)) symbolizes a regime of permanent resonance characterizing the biosphere, as open from inside, by the recursive differential relation between the biosphere and all its holobionts. As such the biosphere is closed on itself as a pure differential entity. (\( \phi_{2} \)) symbolizes the regime of permanent change characterizing the emergence of evolution in the biosphere. As such the biosphere is closed on itself, by the principle of descent with modifications, and by the fact that every holobiont evolves in a niche, while evolving with it.

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Notes

  1. “Knowing the individual through individuation instead of knowing individuation through the individual” (Simondon, 2013, p 24).

  2. The equation of motion is given by the Hamiltonian H, when « q» is position and «p» velocity: ∂H/∂p = dq/dt; −H/∂q = dp/dt.

  3. In more precise technical terms: a fixed-point equation that describes the invariance by transformation can be drawn: Rk(F ∗) = F ∗ (Longo/Montévil, 2014, p141). Rk is called renormalization operator. F is the evolution, or the structure function. In statistical mechanics, it is usually a partition function.

  4. Thanks to the new formula of generalized entropy production invented by England (2013, 2015) open physical systems driven by an energy source in presence of thermal baths can be more and more “irreversible”, inducing the emergence of new constraints (like self-replication), when they become more and more “dissipative”.

  5. See on this point the concept of involution, a philosophical scheme proposed by Guattari and Deleuze (1980), that could be read as some kind of anticipation of these new developments in cladistics.

References

  • Bailly F, Longo G (2006) Mathématiques et sciences de la nature. La singularité physique du vivant, Paris, Hermann

    Google Scholar 

  • Braun E (2015) The unforeseen challenge: from genotype-to-phenotype in cell populations. Rep Prog Phys 68(3):1–46

    Google Scholar 

  • Canguilhem G (1944) Le normal et le pathologique. PUF, Paris

    Google Scholar 

  • Darwin Ch (1859) On the origin of species by means of natural selection, London, John Murray; tr fr, 6ème. Reinwald, Paris, p 1882

    Google Scholar 

  • Dennett D (1995) Darwin’s dangerous idea, A Touchtstone Book

  • England J (2013) Statistical physics of self-replication. J Chem Phys 139:121923

    Article  Google Scholar 

  • England J (2015) Dissipative adaptation in driven self-assembly. Nat Nanotechnol 10(11):919–923

    Article  CAS  Google Scholar 

  • Gould SJ (1989) Wonderful life. Norton and Company. La vie est belle. Les suprises de l’évolution, Paris, Seuil, p 1991

    Google Scholar 

  • Krakauer D, Bertschinger N, Olbrich E et al (2020) The information theory of inKoonindividuality. Theor Biosci 139:209–223

    Article  Google Scholar 

  • Kauffman S, Longo G, Montévil M (2012) No entailing laws, but enablement in the evolution of the biosphere. arXiv:1201.2069 [q-bio.OT]arXiv:1201.2069 [q-bio.OT]

  • Landau L, Lifshitz E (1976) Mechanics, Vol 1, Butterworth-Heinemann

  • Lesne A, Victor JM (2006) Chromatin fiber functional organization: some plausible models. Eur Phys J E 19:279–290

    Article  CAS  Google Scholar 

  • Lewontin R. (2001) Gene, Organism and Environment: a new introduction, in Cycles of Contingency, Oyama. S, Griffiths P. and Gray R.D. editors, MIT Press.

  • Longo G, Montévil M (2014) Perspectives on organisms, Biological time. Symmetries Singularities, Berlin Heidelberg, Springer

    Book  Google Scholar 

  • Lovelock J (1979) Gaïa: a new look at life on earth. Oxford University Press, Oxford

    Google Scholar 

  • Margulis L, Fester R (1991) Symbiosis as a Source of Evolutionnary Innovation: Speciation and Morphogenesis, MIT Press.

  • Marom S, Braun E (2015) Universality, complexity and the praxis of biology: Two case studies. Stud Hist Philos Biol Biomed Sci 53:68–72

    Article  Google Scholar 

  • Miquel PA (2016) Hwang SY (2016) From physical to biological individuation. Prog Biophys Mol Biol 122(1):51–57

    Article  Google Scholar 

  • Monod J (1970) Le hasard et la nécessité. Seuil, Paris

    Google Scholar 

  • Montévil M, Mossio M (2015) Biological organisation as closure of constraints. J Theor Biol 372:179–191

    Article  Google Scholar 

  • Mossio M, Moreno A (2010) Organisational closure in biological organisms. Hist Philos Life Sci 32(2–3):269–88

    PubMed  Google Scholar 

  • Noble D (2006) The music of life biology beyond the genome Oxford. Oxford University Press, Oxford

    Google Scholar 

  • Noble D (2012) A theory of biological relativity. Interface focus 2(1):55–64

    Article  Google Scholar 

  • Prigogine I, Nicolis G (1989) Exploring complexity. W H Freeman & Co Ltd., NewYork

    Google Scholar 

  • Rivera MC, Lake JA (2004) The ring of life provides evidence for a genome fusion origin of eukaryotes. Nature 431(7005):152–155

    Article  CAS  Google Scholar 

  • Simondon G (1964) L’individu et sa genèse physico-biologique. PUF, Paris

    Google Scholar 

  • Soto AM, Sonnenschein C (2005) Emergentism as a default, cancer as a problem of tissue organization. J Biosci 30:101–106

    Article  Google Scholar 

  • Soto AM, Longo G, Montevil M, Sonnenschein C (2016) The biological default state of cell proliferation with variation and motility, a fundamental principle for a theory of organisms. Prog Biophys Mole Biol 122(1):16–23

    Article  Google Scholar 

  • Soto AM, Longo G, Miquel P-A, Montévil M, Mossio M, Perret N, Pocheville A, Sonnenschein C (2016) (2016) Toward a theory of organisms: three founding principles in search of a useful integration. Prog Biophys Mol Biol 122(1):77–82

    Article  Google Scholar 

  • Suh A, Smeds L, Ellegren H (2015) The dynamics of incomplete lineage sorting across the ancient adaptive radiation of neoavian birds. PLoS Biol 13(8):e1002224. https://doi.org/10.1371/journal.pbio.1002224

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Van Fraassen B (1990) Laws and symmetry. Oxford University Press, Oxford

    Google Scholar 

  • Varela F (1980) Principles of biological autonomy. Elsevier, New York

    Google Scholar 

  • Varela F, Maturana H, Uribe R (1974) Autopoiesis: the organization of living systems, its characterization and a model. Biosystems 5:187–196

    Article  CAS  Google Scholar 

  • Vecchi D, Miquel PA, Hernandez I (2018) From biological determination to entangled causation. Acta Biotheor 67(1):19–46

    Article  Google Scholar 

  • Yuri I. Wolf, Mikhail I. Katsnelson, Eugene V. Koonin, (2018) Physical foundations of biological complexity. Proceedings of the National Academy of Sciences 115 (37):E8678-E8687

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Miquel, PA., Hwang, SY. On biological individuation. Theory Biosci. 141, 203–211 (2022). https://doi.org/10.1007/s12064-020-00329-z

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