References
Ashburner M, Ball CA, Blake JA et al. (2000) Gene ontology: tool for the unification of biology. Nat Genet 25(1):25–29
Backes C, Keller A, Küntzer J, Kneissl B, Comtesse N, Elnakady YA, Müller R, Meese E, Lenhof H-P (2007) GeneTrail – advanced gene set enrichment analysis. Nucleic Acids Res 35:WI86
Battke F, Symons S, Nieselt K (2010) Mayday – integrative analytics for expression data. BMC Bioinform 11:121
Dietzsch J, Heinrich J, Nieselt K, Bartz D (2009) SpRay: a visual analytics approach for gene expression data. IEEE Symposium on Visual Analytics Science and Technology (VAST), pp 179–186
Gehlenborg N, Dietzsch J, Nieselt K (2005) A framework for visualization of microarray data and integrated meta information. Inf Vis 4(3):164–175
Keim DA, Mansmann F, Schneidewind J, Ziegler H (2006) Challenges in visual data analysis. Tenth International Conference on Information Visualization, pp 9–16
Keller A, Backes C, Gerasch A, Kaufmann M, Kohlbacher O, Meese E, Lenhof H-P (2009) A novel algorithm for detecting differentially regulated paths based on gene set enrichment analysis. Bioinformatics 25:2787–2794
Küntzer J, Blum T, Gerasch A, Backes C, Hildebrandt A, Kaufmann M, Kohlbacher O, Lenhof HP (2006) BN++ – a biological information system. J Integr Bioinform 3
Lehmann TM, Gold MO, Thies C et al. (2004) Content-based image retrieval in medical applications. Methods Inf Medicine 43(4):354–361
Lowe DG (2004) Distinctive image features from scale-invariant keypoints. Int J Comp Vis 60(2):91–110
Manjunath BS, Salembrer P, Sikora T (2002) Introduction to MPEG-7: multimedia content description interface. Wiley
Michal G (1993) Biochemical Pathways (Poster). Boehringer, Mannheim
Nieselt K, Battke F, Herbig A et al. (2010) The dynamic architecture of the metabolic switch in Streptomyces coelicolor. BMC Genomics 11:10
Oliva A, Torralba A (2006) Building the gist of a scene: the role of global image features in recognition. Prog Brain Res 155:23–36
Rhead B, Karolchik D, Kuhn RM, Hinrichs AS, Zweig AS, Fujita P, Diekhans M, Smith KE, Rosenbloom KR, Raney BJ, Pohl A, Pheasant M, Meyer L, Hsu F, Hillman-Jackson J, Harte RA, Giardine B, Dreszer T, Clawson H, Barber GP, Haussler D, Kent WJ (2010) The UCSC genome browser database: update 2010. Nucleic Acids Res 38:D613-9
Rui Y, Huang TS, Ortega M, Mehrotra S (1998) Relevance feedback: a power tool for interactive content-based image retrieval. IEEE Transactions on circuits and systems for video technology 8(5):644–655
Santamaría R, Therón R, Quintales L (2008) A visual analytics approach for understanding biclustering results from microarray data. BMC Bioinform 9:247–247
Schatz MC, Phillippy AM, Sheiderman B, Salzberg BL (2007) Hawkeye, an interactive visual analytics tool for genome assembly. Genome Biol 8:R34
Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D, Amin N, Schwikowski B, Ideker T (2003) Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res 13:2498–2504
Shaw CD, Dasch GA, Eremeeva ME (2007) IMAS: the interactive multigenomic analysis system. IEEE Symposium on Visual Analytics Science and Technology, pp 59–66
Suderman M, Hallett M (2007) Tools for visually exploring biological networks. Bioinformatics 23:2651–2659
Yang J, Fan J, Hubball D, Gao Y, Luo H, Ribarsky W, Ward M (2007) Semantic image browser: bridging information visualization with automated intelligent image analysis. IEEE Symposium on Visual Analytics Science and Technology (VAST), pp 59–66
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Nieselt, K., Kaufmann, M., Gerasch, A. et al. Visuelle Analytik biologischer Daten. Informatik Spektrum 33, 559–568 (2010). https://doi.org/10.1007/s00287-010-0482-y
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00287-010-0482-y