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Visuelle Analytik biologischer Daten

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  • VISUELLE ANALYTIK BIOLOGISCHER DATEN
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References

  1. Ashburner M, Ball CA, Blake JA et al. (2000) Gene ontology: tool for the unification of biology. Nat Genet 25(1):25–29

    Article  Google Scholar 

  2. Backes C, Keller A, Küntzer J, Kneissl B, Comtesse N, Elnakady YA, Müller R, Meese E, Lenhof H-P (2007) GeneTrail – advanced gene set enrichment analysis. Nucleic Acids Res 35:WI86

    Article  Google Scholar 

  3. Battke F, Symons S, Nieselt K (2010) Mayday – integrative analytics for expression data. BMC Bioinform 11:121

    Google Scholar 

  4. Dietzsch J, Heinrich J, Nieselt K, Bartz D (2009) SpRay: a visual analytics approach for gene expression data. IEEE Symposium on Visual Analytics Science and Technology (VAST), pp 179–186

  5. Gehlenborg N, Dietzsch J, Nieselt K (2005) A framework for visualization of microarray data and integrated meta information. Inf Vis 4(3):164–175

    Article  Google Scholar 

  6. Keim DA, Mansmann F, Schneidewind J, Ziegler H (2006) Challenges in visual data analysis. Tenth International Conference on Information Visualization, pp 9–16

  7. Keller A, Backes C, Gerasch A, Kaufmann M, Kohlbacher O, Meese E, Lenhof H-P (2009) A novel algorithm for detecting differentially regulated paths based on gene set enrichment analysis. Bioinformatics 25:2787–2794

    Article  Google Scholar 

  8. Küntzer J, Blum T, Gerasch A, Backes C, Hildebrandt A, Kaufmann M, Kohlbacher O, Lenhof HP (2006) BN++ – a biological information system. J Integr Bioinform 3

  9. Lehmann TM, Gold MO, Thies C et al. (2004) Content-based image retrieval in medical applications. Methods Inf Medicine 43(4):354–361

    Google Scholar 

  10. Lowe DG (2004) Distinctive image features from scale-invariant keypoints. Int J Comp Vis 60(2):91–110

    Article  Google Scholar 

  11. Manjunath BS, Salembrer P, Sikora T (2002) Introduction to MPEG-7: multimedia content description interface. Wiley

  12. Michal G (1993) Biochemical Pathways (Poster). Boehringer, Mannheim

    Google Scholar 

  13. Nieselt K, Battke F, Herbig A et al. (2010) The dynamic architecture of the metabolic switch in Streptomyces coelicolor. BMC Genomics 11:10

    Article  Google Scholar 

  14. Oliva A, Torralba A (2006) Building the gist of a scene: the role of global image features in recognition. Prog Brain Res 155:23–36

    Article  Google Scholar 

  15. Rhead B, Karolchik D, Kuhn RM, Hinrichs AS, Zweig AS, Fujita P, Diekhans M, Smith KE, Rosenbloom KR, Raney BJ, Pohl A, Pheasant M, Meyer L, Hsu F, Hillman-Jackson J, Harte RA, Giardine B, Dreszer T, Clawson H, Barber GP, Haussler D, Kent WJ (2010) The UCSC genome browser database: update 2010. Nucleic Acids Res 38:D613-9

  16. Rui Y, Huang TS, Ortega M, Mehrotra S (1998) Relevance feedback: a power tool for interactive content-based image retrieval. IEEE Transactions on circuits and systems for video technology 8(5):644–655

    Article  Google Scholar 

  17. Santamaría R, Therón R, Quintales L (2008) A visual analytics approach for understanding biclustering results from microarray data. BMC Bioinform 9:247–247

    Article  Google Scholar 

  18. Schatz MC, Phillippy AM, Sheiderman B, Salzberg BL (2007) Hawkeye, an interactive visual analytics tool for genome assembly. Genome Biol 8:R34

    Article  Google Scholar 

  19. Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D, Amin N, Schwikowski B, Ideker T (2003) Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res 13:2498–2504

    Article  Google Scholar 

  20. Shaw CD, Dasch GA, Eremeeva ME (2007) IMAS: the interactive multigenomic analysis system. IEEE Symposium on Visual Analytics Science and Technology, pp 59–66

  21. Suderman M, Hallett M (2007) Tools for visually exploring biological networks. Bioinformatics 23:2651–2659

    Article  Google Scholar 

  22. Yang J, Fan J, Hubball D, Gao Y, Luo H, Ribarsky W, Ward M (2007) Semantic image browser: bridging information visualization with automated intelligent image analysis. IEEE Symposium on Visual Analytics Science and Technology (VAST), pp 59–66

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Correspondence to Kay Nieselt.

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Nieselt, K., Kaufmann, M., Gerasch, A. et al. Visuelle Analytik biologischer Daten. Informatik Spektrum 33, 559–568 (2010). https://doi.org/10.1007/s00287-010-0482-y

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  • DOI: https://doi.org/10.1007/s00287-010-0482-y

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