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Bayesian Local Influence of Generalized Failure Time Models with Latent Variables and Multivariate Censored Data

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Abstract

We develop a Bayesian local influence procedure for generalized failure time models with latent variables and multivariate censored data. We propose to use the penalized splines (P-splines) approach to formulate the unknown functions of the proposed models. We assess the effects of minor perturbations to individual observations, the prior distributions of parameters, and the sampling distribution on statistical inference through various perturbation schemes. The first-order local influence measure is used to quantify the degree of minor perturbations to different aspects of a statistical model with the use of Bayes factor as an objective function. Simulation studies show that the empirical performance of the Bayesian local influence procedure is satisfactory. An application to a study of renal disease for type 2 diabetes patients is presented.

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References

  • Bentler, P.M., & Wu, E. (2002). EQS6: structural equations program manual Encino, CA: Multivariate Software.

  • Berger, J.O. (1994). An overview of robust Bayesian analysis. Test, 3, 5–58.

    Article  MathSciNet  Google Scholar 

  • Berger, J.O., Rios Insua, D., Ruggeri, F. (2000). Bayesian robustness. Robust Bayesian Analysis, 1-32. In Rios Insua, D., & Ruggeri, F. (Eds.) Lecture Notes in Statistics, 152. New York: Springer-Verlag.

  • Bollen, K.A. (1989). Structural equations with latent variables. New York: Wiley.

    Book  Google Scholar 

  • Chen, M.H., & Schmeiser, B. (1993). Performance of the Gibbs, hit-and-run, and Metropolis samplers. Journal of Computational and Graphical Statistics, 2, 251–272.

    Article  MathSciNet  Google Scholar 

  • Chen, J., Liu, P.F., Song, X.Y. (2013). Bayesian diagnostics of transformation structural equation models. Computational Statistics and Data Analysis, 68, 111–128.

    Article  MathSciNet  Google Scholar 

  • Chen, M., Silva, J., Paisley, J., Wang, C., Dunson, D., Carin, L. (2010). Compressive sensing on manifolds using a nonparametric mixture of factor analyzers: algorithm and performance bounds. IEEE Transactions on Signal Processing, 58, 6140–6155.

    Article  MathSciNet  Google Scholar 

  • Cook, R.D. (1986). Assessment of local influence (with discussion). Journal of the Royal Statistical Society, Series B, 48, 133–169.

    MathSciNet  MATH  Google Scholar 

  • De Boor, C. (1978). A practical guide to splines. Berlin: Springer-Verlag.

    Book  Google Scholar 

  • Dey, D.K., Ghosh, S.K., Lou, K.R. (1996). On local sensitivity measures in Bayesian analysis (with discussion). Bayesian Robustness, 21-40. In Berger, J.O., Betro, B., Moreno, E., Pericchi, L.R., Ruggeri, F., Salinetti, G., Wasserman, L. (Eds.) IMS Lecture Notes-Monograph Series, 29, Hayward, CA.

  • Eilers, P.H., & Marx, B.D. (1996). Flexible smoothing with B-splines and penalties. Statistical Science, 11, 89–102.

    Article  MathSciNet  Google Scholar 

  • Fahrmeir, L., & Raach, A. (2007). A Bayesian semiparametric latent variable model for mixed responses. Psychometrika, 72, 327–346.

    Article  MathSciNet  Google Scholar 

  • Gustafson, P., & Wasserman, L. (1995). Local sensitivity diagnostics for Bayesian inference. Annals of Statistics, 23, 2153–2167.

    Article  MathSciNet  Google Scholar 

  • Gustafson, P. (1996). Local sensitivity of inferences to prior marginals. Journal of the American Statistical Association, 91, 774–781.

    Article  MathSciNet  Google Scholar 

  • Hastings, W.K. (1970). Monte Carlo sampling methods using Markov chains and their application. Biometrika, 57, 97–100.

    Article  MathSciNet  Google Scholar 

  • Ibrahim, J.G., Zhu, H.T., Tang, N.S. (2011). Bayesian local influence for survival models. Lifetime Data Analysis, 17, 43–70.

    Article  MathSciNet  Google Scholar 

  • Jöreskog, K.G., & Sörbom, D. (1996). LISREL 8: User’s Reference Guide. Scientific Software International.

  • Kass, R.E., Tierney, L., Kadane, J.B. (1989). Approximate methods for assessing influence and sensitivity in Bayesian analysis. Biometrika, 76, 663–674.

    Article  MathSciNet  Google Scholar 

  • Lang, S., & Brezger, A. (2004). Bayesian P-splines. Journal of Computational and Graphical Statistics, 13, 183–212.

    Article  MathSciNet  Google Scholar 

  • Lesaffre, E., & Verbeke, G. (1998). Local influence in linear mixed models. Biometrics, 54, 570–582.

    Article  Google Scholar 

  • Lin, D.Y. (1994). Cox regression analysis of multivariate failure time data: the marginal approach. Statistics in Medicine, 13, 2233–2247.

    Article  Google Scholar 

  • Liu, J.S., Liang, F., Wong, W.H. (2000). The multiple-try method and local optimization in Metropolis sampling. Journal of the American Statistical Association, 95, 121–134.

    Article  MathSciNet  Google Scholar 

  • Luk, A.O., So, W.Y., Ma, R.C. (2008). Metabolic syndrome predicts new onset of chronic kidney disease in 5,829 patients with Type 2 diabetes: a 5-year prospective analysis of the Hong Kong Diabetes Registry. Diabetes Care, 31, 2357–2361.

    Article  Google Scholar 

  • McCulloch, R.E. (1989). Local model influence. Journal of the American Statistical Association, 84, 473–478.

    Article  Google Scholar 

  • Metropolis, N., Rosenbluth, A.W., Rosenbluth, M.N., Teller, A.H., Teller, E. (1953). Equation of state calculations by fast computing machines. The Journal of Chemical Physics, 21, 1087–1092.

    Article  Google Scholar 

  • Millar, R.B., & Stewart, W.S. (2007). Assessment of locally influential observations in Bayesian models. Bayesian Analysis, 2, 365–384.

    Article  MathSciNet  Google Scholar 

  • Pan, D., He, H.J., Song, X.Y., Sun, L.Q. (2015). Regression analysis of additive hazards model with latent variables. Journal of the American Statistical Association, 110, 1148–1159.

    Article  MathSciNet  Google Scholar 

  • Pan, J.X., & Fang, K.T. (2002). Growth curve models and statistical diagnostics. Berlin: Springer.

    Book  Google Scholar 

  • Pan, W., & Louis, T.A. (2000). A linear mixed-effects model for multivariate censored data. Biometrics, 56, 160–166.

    Article  Google Scholar 

  • Prentice, R.L., & Cai, J. (1992). Covariance and survivor function estimation using censored multivariate failure time data. Biometrika, 79, 495–512.

    Article  MathSciNet  Google Scholar 

  • Roy, J., & Lin, X. (2000). Latent variable models for longitudinal data with multiple continuous outcomes. Biometrics, 56, 1047–1054.

    Article  MathSciNet  Google Scholar 

  • Roy, J., & Lin, X. (2002). Analysis of multivariate longitudinal outcomes with nonignorable dropouts and missing covariates: changes in methadone treatment practices. Journal of the American Statistical Association, 97, 40–52.

    Article  MathSciNet  Google Scholar 

  • Sammel, M.D., & Ryan, L.M. (1996). Latent variable models with fixed effects. Biometrics, 52, 650–663.

    Article  MathSciNet  Google Scholar 

  • Song, X.Y., & Lee, S.Y. (2004a). Local influence of two-level latent variable models with continuous and polytomous data. Statistica Sinica, 14, 317–332.

  • Song, X.Y., & Lee, S.Y. (2004b). Local influence analysis for mixture of structural equation models. Journal of Classification, 21, 111–137.

  • Song, X.Y., & Lee, S.Y. (2012). Basic and advanced bayesian structural equation modeling: with applications in the medical and behavioral sciences. New York: Wiley.

    Book  Google Scholar 

  • Song, X.Y., & Lu, Z.H. (2012). Semiparametric transformation models with Bayesian P-splines. Statistics and Computing, 22, 1085–1098.

    Article  MathSciNet  Google Scholar 

  • Song, X.Y., Pan, D., Liu, P.F., Liu, P.F., Cai, J.H. (2016). Bayesian analysis of transformation latent variable models with multivariate censored data. Statistical Methods in Medical Research, 25, 2337–2358.

    Article  MathSciNet  Google Scholar 

  • Tang, N.S., & Duan, X.D. (2014). Bayesian influence analysis of generalized partial linear mixed models for longitudinal data. Journal of Multivariate Analysis, 126, 86–99.

    Article  MathSciNet  Google Scholar 

  • Thomas, W., & Cook, R.D. (1989). Assessing influence on regressing coefficients in generalized linear models. Biometrika, 76, 741–749.

    Article  MathSciNet  Google Scholar 

  • van der Linde, A. (2007). Local influence on posterior distributions under multiplicative modes of perturbation. Bayesian Analysis, 2, 319–332.

    Article  MathSciNet  Google Scholar 

  • Yu, Z., & Lin, X. (2008). Nonparametric regression using local kernel estimating equations for correlated failure time data. Biometrika, 95, 123–137.

    Article  MathSciNet  Google Scholar 

  • Zhu, H.T., & Lee, S.Y. (2001). Local influence for incomplete-data models. Journal of the Royal Statistical Society. Series B, 61, 111–126.

    Article  MathSciNet  Google Scholar 

  • Zhu, H.T., Ibrahim, J.G., Tang, N.S. (2011). Bayesian influence analysis: a geometric approach. Biometrika, 98, 307–323.

    Article  MathSciNet  Google Scholar 

  • Zhu, H.T., & Ibrahim, J.G. (2007). Lee, S. Y. and Zhang, H.P Perturbation selection and influence measures in local influence analysis. The Annals of Statistics, 35, 2565–2588.

    Article  MathSciNet  Google Scholar 

  • Zhu, H.T., Ibrahim, J.G., Cho, H., Tang, N.S. (2012). Bayesian case influence measures for statistical models with missing data. Journal of Computational and Graphical Statistics, 21, 253–271.

    Article  MathSciNet  Google Scholar 

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Funding

This research was supported by GRF 14305014 and 14601115 from the Research Grant Council of the Hong Kong Special Administration Region, Direct Grants from the Chinese University of Hong Kong, the National Natural Science Foundation of China (Grant No. 11471277).

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Correspondence to Xinyuan Song.

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Ouyang, M., Song, X. Bayesian Local Influence of Generalized Failure Time Models with Latent Variables and Multivariate Censored Data. J Classif 37, 298–316 (2020). https://doi.org/10.1007/s00357-018-9294-6

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