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Data Mining and Pattern Recognition in Agriculture

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Abstract

Modern communication, sensing, and actuator technologies as well as methods from signal processing, pattern recognition, and data mining are increasingly applied in agriculture. Developments such as increased mobility, wireless networks, new environmental sensors, robots, and the computational cloud put the vision of a sustainable agriculture for anybody, anytime, and anywhere within reach. Yet, precision farming is a fundamentally new domain for computational intelligence and constitutes a truly interdisciplinary venture. Accordingly, researchers and experts of complementary skills have to cooperate in order to develop models and tools for data intensive discovery that allow for operation through users that are not necessarily trained computer scientists. We present approaches and applications that address these challenges and underline the potential of data mining and pattern recognition in agriculture.

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Notes

  1. Note that, for the time being, our methodology is tailored towards basic agricultural research carried out in the lab; yet, as costs of hyper-spectral sensors are decreasing, corresponding technologies may soon be applicable in outdoor scenarios.

References

  1. Abdeen A, Schnell J, Miki B (2010) Transcriptome analysis reveals absence of unintended effects in drought-tolerant transgenic plants overexpressing the transcription factor abf3. BMC Genomics 11(69)

  2. Agrios G (1997) Plant pathology, 4th edn. Academic Press, San Diego

    Google Scholar 

  3. Ballvora A, Römer C, Wahabzada M, Rascher U, Thurau C, Bauckhage C, Kersting K, Plümer L, Leon J (2013) Deep phenotyping of early plant response to abiotic stress using non-invasive approaches in barley. In: Zhang G, Li C, Liu X (eds) Advance in Barley sciences. Springer, Berlin, pp 301–316. Chap 26

    Google Scholar 

  4. Bauckhage C (2006) Tree-based signatures for shape classification. In: Proc ICIP

    Google Scholar 

  5. Bauckhage C, Kersting K, Schmidt A (2012) Agriculture’s technological makeover. IEEE Pervasive Comput 11(2):4–7

    Article  Google Scholar 

  6. Bechar I, Moisan S, Thonnat M, Bremond F (2010) On-line video recognition and counting of harmful insects. In: Proc ICPR

    Google Scholar 

  7. Bergamaschi S, Sala A (2009) Creating and querying an integrated ontology for molecular and phenotypic cereals data. In: Sicilia M, Lytras M (eds) Metadata and semantics. Springer, Berlin, p 445

    Chapter  Google Scholar 

  8. Blanco P, Metternicht G, Del Valle H (2009) Improving the discrimination of vegetation and landform patterns in sandy rangelands: a synergistic approach. Int J Remote Sens 30(10):2579–2605

    Article  Google Scholar 

  9. Boyer J (1982) Plant productivity and environment. Science 218:443–448

    Article  Google Scholar 

  10. Burrell J, Brooke T, Beckwith R (2004) Vineyard computing: sensor networks in agricultural production. IEEE Pervasive Comput 3(1):38–45

    Article  Google Scholar 

  11. Chakraborty S, Subramanian L (2011) Location specific summarization of climatic and agricultural trends. In: Proc WWW

    Google Scholar 

  12. Civril A, Magdon-Ismail M (2009) On selecting a maximum volume sub-matrix of a matrix and related problems. Theor Comput Sci 410(47–49):4801–4811

    Article  MathSciNet  MATH  Google Scholar 

  13. Crowley M, Poole D (2011) Policy gradient planning for environmental decision making with existing simulators. In: Proc AAAI

    Google Scholar 

  14. Ebrahim Y, Ahmed M, Chau S, Abdelsalam W (2007) An efficient shape representation and description technique. In: Proc ICIP

    Google Scholar 

  15. Girard A, Rasmussen C, Quinonero Candela J, Murray-Smith R (2002) Gaussian process priors with uncertain inputs—application to multiple-step ahead time series forecasting. In: Proc NIPS

    Google Scholar 

  16. Gnomes C (2009) Computational sustainability: computational methods for a sustainable environment, economy, and society. The Bridge 39(4):5–13

    Google Scholar 

  17. Gocht A, Roder N (2011) Salvage the treasure of geographic information in farm census data. In: Proc int Congress European association of agricultural economists

    Google Scholar 

  18. Golovin D, Krause A, Gardner B, Converse S, Morey S (2011) Dynamic resource allocation in conservation planning. In: Proc AAAI

    Google Scholar 

  19. Gonzales R, Woods R (2008) Digital image processing, 3rd edn. Pearson Prentice Hall, New York

    Google Scholar 

  20. Guo P, Baum M, Grando S, Ceccarelli S, Bai G, Li R, von Korff M, Varshney R, Graner A, Valkoun J (2010) Differentially expressed genes between drought-tolerant and drought-sensitive barley genotypes in response to drought stress during the reproductive stage. J Exp Bot 60(12):3531–3544

    Article  Google Scholar 

  21. Hafiane A, Seetharaman G, Palaniappan K, Zavidovique B (2008) Rotationally invariant hashing of median binary patterns for texture classification. In: Proc ICIAR

    Google Scholar 

  22. Kersting K, Wahabzada M, Roemer C, Thurau C, Ballvora A, Rascher U, Leon J, Bauckhage C, Pluemer L (2012) Simplex distributions for embedding data matrices over time. In: Proc SDM

    Google Scholar 

  23. Kersting K, Xu Z, Wahabzada M, Bauckhage C, Thurau C, Römer C, Ballvora A, Rascher U, Leon J, Plümer L (2012) Pre-symptomatic prediction of plant drought stress using Dirichlet-aggregation regression on hyperspectral images. In: Proc AAAI

    Google Scholar 

  24. Kui F, Juan W, Weiqiong B (2011) Research of optimized agricultural information collaborative filtering recommendation systems. In: Proc ICICIS

    Google Scholar 

  25. Kumar V, Dave V, Bhadauriya R, Chaudhary S (2013) Krishimantra: agricultural recommendation system. In: Proc ACM symp on computing for development

    Google Scholar 

  26. Laykin S, Alchanatis V, Edan Y (2012) On-line multi-sateg sorting algorithm for agriculture products. Pattern Recognit 45(7):2843–2853

    Article  Google Scholar 

  27. Lebreton C, Lazic-Jancic V, Steed A, Pekic S, Quarrie S (1995) Identification of qtl for drought responses in maize and their use in testing causal relationships between traits. J Exp Bot 46(7):853–865

    Article  Google Scholar 

  28. Lin H, Cheng J, Pei Z, Zhang S, Hu Z (2009) Monitoring sugarcane growth using envisat asar data. IEEE Trans Geosci Remote Sens 47(8):2572–2580

    Article  Google Scholar 

  29. Loew A, Ludwig R, Mauser W (2006) Derivation of surface soil moisture from envisat asar wide swath and image mode data in agricultural areas. IEEE Trans Geosci Remote Sens 44(4):889–899

    Article  Google Scholar 

  30. McKay J, Richards J, Sen S, Mitchell-Olds T, Boles S, Stahl E, Wayne T, Juenger T (2008) Genetics of drought adaptation in arabidopsis thaliana ii. qtl analysis of a new mapping population, kas-1 × tsu-1. Evolution 62(12):3014–3026

    Article  Google Scholar 

  31. Medjahed B, Gosky W (2009) A notification infrastructure for semantic agricultural web services. In: Sicilia M, Lytras M (eds) Metadata and semantics. Springer, Berlin, pp 455–462

    Chapter  Google Scholar 

  32. Mewes T, Franke J, Menz G (2009) Data reduction of hyperspectral remote sensing data for crop stress detection using different band selection methods. In: Proc IEEE int geoscience and remote sensing symp

    Google Scholar 

  33. Mitchell T (1997) Machine learning. McGraw-Hill, New York

    MATH  Google Scholar 

  34. Ojala T, Pietikäinen M, Mäenpää T (2002) Multiresolution gray-scale and rotation invariant texture classification with local binary patterns. IEEE Trans Pattern Anal Mach Intell 24(7):971–987

    Article  Google Scholar 

  35. Passioura J (2002) Environmental biology and crop improvement. Funct Plant Biol 29:537–554

    Article  Google Scholar 

  36. Petrik M, Zilberstein S (2011) Linear dynamic programs for resource management. In: Proc AAAI

    Google Scholar 

  37. Pinnisi E (2008) The blue revolution, drop by drop, gene by gene. Science 320(5873):171–173

    Article  Google Scholar 

  38. Rabbani M, Maruyama K, Abe H, Khan M, Katsura K, Ito Y, Yoshiwara K, Seki M, Shinozaki K, Yamaguchi-Shinozaki K (2010) Monitoring expression profiles of rice genes under cold, drought, and high-salinity stresses and abscisic acid application using cdna microarray and rna gel-blot analyses. Plant Physiol 133(4):1755–1767

    Article  Google Scholar 

  39. Rascher U, Nichol C, Small C, Hendricks L (2007) Monitoring spatio-temporal dynamics of photosynthesis with a portable hyperspectral imaging system. Photogramm Eng Remote Sens 73(1):45–56

    Article  Google Scholar 

  40. Rascher U, Pieruschka R (2008) Spatio-temporal variations of photosynthesis: the potential of optical remote sensing to better understand and scale light use efficiency and stresses of plant ecosystems. Precis Agric 9(6):355–366

    Article  Google Scholar 

  41. Rasmussen C, Williams C (2006) Gaussian processes for machine learning. MIT Press, Cambridge

    MATH  Google Scholar 

  42. Rocha A, Hauagge D, Wainer J, Goldenstein S (2010) Automatic fruit and vegetable classification from images. Comput Electron Agric 70(1):96–104

    Article  Google Scholar 

  43. Römer C, Bürling K, Rumpf T, Hunsche M, Noga G, Plümer L (2010) Robust fitting of fluorescence spectra for presymptomatic wheat leaf rust detection with support vector machines. Comput Electron Agric 74(1):180–188

    Google Scholar 

  44. Römer C, Wahabzada M, Ballvora A, Pinto F, Rossini M, Panigada C, Behmann J, Leon J, Thurau C, Bauckhage C, Kersting K, Rascher U, Plümer L (2012) Early drought stress detection in cereals: simplex volume maximization for hyperspectral image analysis. Funct Plant Biol 39(11):878–890

    Article  Google Scholar 

  45. Rumpf T, Mahlein AK, Steiner U, Oerke EC, Plümer L (2010) Early detection and classification of plant diseases with support vector machines based on hyperspectral reflectance. Comput Electron Agric 74(1):91–99

    Article  Google Scholar 

  46. RußG, Brenning A (2010) Data mining in precision agriculture: management of spatial information. In: Proc IPMU

    Google Scholar 

  47. Sankaran S, Mishra A, Ehsani R, Davis C (2010) A review of advanced techniques for detecting plant diseases. Comput Electron Agric 72(1):1–13

    Article  Google Scholar 

  48. Satalino G, Mattia F, Le Toan T, Rinaldi M (2009) Wheat crop mapping by using asar ap data. IEEE Trans Geosci Remote Sens 47(2):527–530

    Article  Google Scholar 

  49. Schmitz M, Martini D, Kunisch M, Mosinger HJ (2009) Agroxml: enabling standardized, platform-independent Internet data exchange in farm management information systems. In: Sicilia M, Lytras M (eds) Metadata and semantics. Springer, Berlin, pp 463–467

    Chapter  Google Scholar 

  50. Thurau C, Kersting K, Wahabzada M, Bauckhage C (2012) Descriptive matrix factorization for sustainability: adopting the principle of opposites. Data Min Knowl Discov 24(2):325–354

    Article  MathSciNet  MATH  Google Scholar 

  51. Vernon R (ed) (2001) Knowing where you’re going: information systems for agricultural research management. International Service for Agricultural Research (ISNAR) (2001)

  52. Wark T, Corke P, Klingbeil L, Guo Y, Crossman C, Valencia P, Swain D, Bishop-Hurley G (2007) Transforming agriculture through pervasive wireless sensor networks. IEEE Pervasive Comput 6(2):50–57

    Article  Google Scholar 

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Acknowledgements

Parts of the work reported here were conducted within the project SmartDDS which is funded by the Bundesanstalt für Landwirschaft und Ernährung. Kristian Kersting was supported by the Fraunhofer ATTRACT fellowship “Statistical Relational Activity Mining”. The authors gratefully acknowledge this support.

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Correspondence to Christian Bauckhage.

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Bauckhage, C., Kersting, K. Data Mining and Pattern Recognition in Agriculture. Künstl Intell 27, 313–324 (2013). https://doi.org/10.1007/s13218-013-0273-0

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