skip to main content
10.1145/1389095.1389129acmconferencesArticle/Chapter ViewAbstractPublication PagesgeccoConference Proceedingsconference-collections
research-article

On the evolution of motility and intelligent tactic response

Published: 12 July 2008 Publication History

Abstract

We present our first results concerning the de novo evolution of motility and tactic response in systems of digital organisms. Our model organism was E. coli and the behavior of interest was gradient following, since this represents simple decision-making. Our first experiments demonstrated the evolution of a tactic response, both when provided with a hand-coded system to remember previous gradient concentrations and without this crutch where the organisms must determine how to store previous values on their own. In our second set of experiments we investigated two different rotation strategies, random and systematic, and found no significant performance difference between the two strategies. These experiments served as a stepping-stone and proof-of-concept of the infrastructure needed for our future work on the evolution of simple intelligence.

References

[1]
C. Adami, C. A. Ofria, and T. C. Collier. Evolution of biological complexity. Proceedings of the Natlional Academy of Science, 97:4463--4468, 2000.
[2]
J. Adler. Chemotaxis in bacteria. Science, 153(3737):708--716, August 12 1966.
[3]
J. Adler. Chemotaxis in bacteria. Annual Review of Biochemistry, 44:341--356, 1975.
[4]
J. Adler. Primitive sensory and communication systems: the taxes and tropisms of micro-organisms and cells, chapter Chemotaxis in bacteria, pages 91--100. Academic Press, London, 1975.
[5]
J. Ayers, J. Witting, N. McGruer, C. Olcott, and D. Massa. Lobster robots. In T. Wu and K. N, editors, Proceedings of the International Symposium on Aqua Biomechanisms, Tokai University, 2000.
[6]
R. D. Beer and J. C. Gallagher. Evolving dynamical neural networks for adaptive behavior. Adaptive Behavior, 1(1):91--122, 1992.
[7]
H. C. Berg. E. coli in motion. Springer, New York, 2004.
[8]
H. C. Berg and D. A. Brown. Chemotaxis in \textitEscherichia coli analysed by three-dimensional tracking. Nature, 239:500--504, 27 October 1972.
[9]
V. Braitenberg. Vehicles: experiments in synthetic psychology. MIT Press, Cambridge, MA, 1984.
[10]
K. L. Briggman, H. D. I. Arbanel, and W. B. Kristan Jr. Optical imaging of neural populations during decision-making. Science, 307(5711):896--901, 2005.
[11]
M. J. Carlile. Primitive sensory and communication systems: the taxes and tropisms of micro-organisms and cells, chapter Taxes and tropisms: diversity, biological significance and evolution, pages 1--28. Academic Press, London, 1975.
[12]
A. L. Christensen and M. Dorigo. Evolving an integrated phototaxis and hole-avoidance behavior for a swarm-bot. In L. M. Rocha, L. S. Yaeger, M. A. Bedau, D. Floreano, R. L. Goldstone, and A. Vespignani, editors, Proceedings of the 10th International Conference on the Simulation and Synthesis of Living Systems (Alife X), pages 248--254. MIT Press, Cambridge, MA, 2006.
[13]
J. D. E. Koshland. A model regulatory system: bacterial chemotaxis. Physiological Reviews, 59(4):811--862, October 1979.
[14]
D. C. Dennett. The new replicators. In M. Pagel, editor, Encyclopedia of Evolution, pages E83--E92. Oxford University Press, New York, 2002.
[15]
A. Dhariwal, G. Sukhatme, and A. A. Requicha. Bacterium-inspired robots for environmental monitoring. In Proceedings of 2004 IEEE/RSJ International Conference on Robotics and Automation, pages 1436--1443, New Orleans, LA, April 2004.
[16]
M. Eyiyurekli, P. I. Lelkes, and D. E. Breen. A computational system for investigating chemotaxis-based cell aggregation. In F. A. e Costa, L. M. Rocha, E. Costa, I. Harvey, and A. Coutinho, editors, Advances in Artificial Life, 9th European Conference, ECAL 2007, Lisbon, Portugal, September 10-14, 2007, Proceedings ECAL, number 4648 in Lecture Notes in Computer Science, pages 1034--1049. Springer, 2007.
[17]
D. Floreano and F. Mondada. Evolutionary neurocontrollers for autonomous mobile robots. Neural Networks, 11:1461--1478, 1998.
[18]
F. W. Grasso, T. R. Consi, D. C. Mountain, and J. Atema. Biomimetic lobster performs chemo-orientation in turbulence using a pair of spatially separated sensors: progress and challenges. Robotics and Autonomous Systems, 30:115--131, 2000.
[19]
J. Kodjabachian and J.-A. Meyer. Evolution and development of neural controllers for locomotion, gradient-following, and obstacle-avoidance in artificial insects. IEEE Transactions on Neural Networks, 9(5):796--812, 1998.
[20]
R. E. Lenski, C. Ofria, R. T. Pennock, and C. Adami. The evolutionary origin of complex features. Nature, 423:139--144, 2003.
[21]
T. M. Morse, S. R. Lockery, and T. C. Ferrée. Robust spatial navigation in a robot inspired by chemotaxis in \textitCaenorhabditis elegans. Adaptive Behavior, 6:393--410, 1998.
[22]
C. Ofria, C. Adami, and T. C. Collier. Design of evolvable computer languages. IEEE Transactions in Evolutionary Computation, 17:528--532, 2002.
[23]
C. Ofria and C. O. Wilke. Avida: a software platform for research in computational evolutionary biology. In Artificial Life 10, pages 191--229, 1994.
[24]
M. D. Onsum and A. P. Arkin. Autonomous mobile robot control based on white blood cell chemotaxis. Lecture Notes in Computer Science, 3082:9--19, 2005.
[25]
G. W. Ordal. Bacterial chemotaxis: a primitive sensory system. BioScience, 30(6):408--411, 1980.
[26]
T. Sharpe and B. Webb. Simulated and situated models of chemical trail following in ants. In R. Pfeifer, B. Blumberg, J.-A. Meyer, and S. W. Wilson, editors, From animals to animats 5: proceedings of the fifth international conference on simulation of adaptive behavior, pages 195--204, Cambridge, MA, 1998. MIT Press.
[27]
H. A. Simon. Models of man--social and rational. John Wiley and Sons, New York, 1957.
[28]
O. S. Soyer, T. Pfeiffer, and S. Bonhoeffer. Simulating the evolution of signal transduction pathways. Journal of Theoretical Biology, 241:223--232, 2006.
[29]
R. A. Watson, S. G. Ficici, and J. B. Pollack. Embodied evolution: embodying an evolutionary algorithm in a population of robots. In P. J. Angeline, Z. Michalewicz, M. Schoenauer, X. Yao, and A. Zalzala, editors, Proceedings of the Congress on Evolutionary Computation, volume 1, pages 335--342, Mayflower Hotel, Washington D.C., USA, 6-9 1999. IEEE Press.
[30]
B. Webb. Robotic experiments in cricket phonotaxis. In D. Cliff, P. Husbands, J. Meyer, and S. Wilson, editors, From animals to animats 3: proceedings of the fifth international conference on simulation of adaptive behavior, Cambridge, MA, 1994. MIT Press.
[31]
B. Webb. Using robots to model animals: a cricket test. Robotics and Autonomous Systems, 16:117--134, 1995.
[32]
B. Webb. Robots, crickets and ants: models of neural control of chemotaxis and phonotaxis. Neural Networks, 11:1479--1496, 1998.

Cited By

View all
  • (2014)There and back againProceedings of the 2014 Annual Conference on Genetic and Evolutionary Computation10.1145/2576768.2598363(689-696)Online publication date: 12-Jul-2014
  • (2013)Understanding Evolutionary Potential in Virtual CPU Instruction Set ArchitecturesPLoS ONE10.1371/journal.pone.00832428:12(e83242)Online publication date: 23-Dec-2013
  • (2013)Artificial Intelligence Evolved from Random Behaviour: Departure from the State of the ArtArtificial Intelligence, Evolutionary Computing and Metaheuristics10.1007/978-3-642-29694-9_2(19-41)Online publication date: 2013
  • Show More Cited By

Recommendations

Comments

Information & Contributors

Information

Published In

cover image ACM Conferences
GECCO '08: Proceedings of the 10th annual conference on Genetic and evolutionary computation
July 2008
1814 pages
ISBN:9781605581309
DOI:10.1145/1389095
  • Conference Chair:
  • Conor Ryan,
  • Editor:
  • Maarten Keijzer
Permission to make digital or hard copies of all or part of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. Copyrights for components of this work owned by others than ACM must be honored. Abstracting with credit is permitted. To copy otherwise, or republish, to post on servers or to redistribute to lists, requires prior specific permission and/or a fee. Request permissions from [email protected]

Sponsors

Publisher

Association for Computing Machinery

New York, NY, United States

Publication History

Published: 12 July 2008

Permissions

Request permissions for this article.

Check for updates

Author Tags

  1. avida
  2. chemotaxis
  3. digital evolution
  4. experimental evolution
  5. gradient following

Qualifiers

  • Research-article

Conference

GECCO08
Sponsor:

Acceptance Rates

Overall Acceptance Rate 1,669 of 4,410 submissions, 38%

Contributors

Other Metrics

Bibliometrics & Citations

Bibliometrics

Article Metrics

  • Downloads (Last 12 months)6
  • Downloads (Last 6 weeks)3
Reflects downloads up to 05 Mar 2025

Other Metrics

Citations

Cited By

View all
  • (2014)There and back againProceedings of the 2014 Annual Conference on Genetic and Evolutionary Computation10.1145/2576768.2598363(689-696)Online publication date: 12-Jul-2014
  • (2013)Understanding Evolutionary Potential in Virtual CPU Instruction Set ArchitecturesPLoS ONE10.1371/journal.pone.00832428:12(e83242)Online publication date: 23-Dec-2013
  • (2013)Artificial Intelligence Evolved from Random Behaviour: Departure from the State of the ArtArtificial Intelligence, Evolutionary Computing and Metaheuristics10.1007/978-3-642-29694-9_2(19-41)Online publication date: 2013
  • (2009)Evolving cooperative pheromone usage in digital organisms2009 IEEE Symposium on Artificial Life10.1109/ALIFE.2009.4937711(184-191)Online publication date: Mar-2009
  • (2009)Cockroaches, drunkards, and climbers: Modeling the evolution of simple movement strategies using digital organisms2009 IEEE Symposium on Artificial Life10.1109/ALIFE.2009.4937699(92-99)Online publication date: Mar-2009

View Options

Login options

View options

PDF

View or Download as a PDF file.

PDF

eReader

View online with eReader.

eReader

Figures

Tables

Media

Share

Share

Share this Publication link

Share on social media