skip to main content
10.1145/1882992.1883117acmotherconferencesArticle/Chapter ViewAbstractPublication PagesihiConference Proceedingsconference-collections
demonstration

Visual coder: clinical coding in translational research

Published:11 November 2010Publication History

ABSTRACT

As the fields of translational research and personalized medicine evolve, the need clinicians and scientists have to exchange experimental results is growing. As different terminologies are used to describe research results in different fields, a tool which could provide assistance in the automated integration of scientific and medical experimental results would be facilitated by semantic tagging using terminology sourced from a domain spanning thesaurus[5]. We present Visual Coder, a visualization tool for performing clinical coding of anatomic pathology structured reports (APSR) for the purpose of multidisciplinary knowledge exchange. The tool provides a visualization of a translational research terminology server and a graphical user interface which provides a set of visual tools to facilitate clinical coding.

References

  1. Tim Benson. Principles of Health Interoperability. Springer, 2009.Google ScholarGoogle Scholar
  2. Clement and et al. Loinc, a universal standard for identifying laboratory observations: A 5-year update. Clinical Chemistry, 49:624--633, 2003.Google ScholarGoogle ScholarCross RefCross Ref
  3. Theresia Gschwandtner, Katharina Kaiser, Patrick Martini, and Silvia Miksch. Easing semantically enriched information retrieval--an interactive semi-automatic annotation system for medical documents. International Journal of Human-Computer Studies, 68(6): 370--385, 2010. Human-Computer Interaction for Medicine and Health care (HCI4MED): Towards making Information usable. Google ScholarGoogle ScholarDigital LibraryDigital Library
  4. Guoqian Jiang, Jyotishman Pathak, and Christopher G. Chute. Formalizing icd coding rules using formal concept analysis. Journal of Biomedical Informatics, 42(3):504--517, 2009. Auditing of Terminologies. Google ScholarGoogle ScholarDigital LibraryDigital Library
  5. J. Lahteenmaki, J. Leppanen, and H. Kaijanranta. Interoperability of personal health records. In Engineering in Medicine and Biology Society, 2009. EMBC 2009. Annual International Conference of the IEEE, pages 1726--1729, 3-6 2009.Google ScholarGoogle ScholarCross RefCross Ref
  6. X. Lin and D. Zhang. Visualization of knowledge structures. Proceedings of the 11th international Conference information Visualization, IV:476--484, July 2007. Google ScholarGoogle ScholarDigital LibraryDigital Library
  7. B. Shneiderman. The eyes have it: A task by data type taxonomy for information visualizations. Proceedings of the 1996 IEEE Symposium on Visual Languages, pages 336--343, September 1996. Google ScholarGoogle ScholarDigital LibraryDigital Library
  8. E. Sundvall, M. NystrŽm, H. Petersson, and H. Ahlfeldt. Interactive visualization and navigation of complex terminology systems, emplified by snomed ct. Studies on Health Technology and Informatics, 124:851--856, 2006.Google ScholarGoogle Scholar
  9. Frank van Ham and Adam Perer. Search, show context, expand on demand: Supporting large graph exploration with degree-of-interest. IEEE Transactions on Visualization and Computer Graphics, 15:953--960, 2009. Google ScholarGoogle ScholarDigital LibraryDigital Library
  10. Colin Ware. Information Visualization: Perception for Design. Morgan Kaufmann Publishers Inc., San Francisco, CA, USA, 2004. Google ScholarGoogle ScholarDigital LibraryDigital Library

Index Terms

  1. Visual coder: clinical coding in translational research

      Recommendations

      Comments

      Login options

      Check if you have access through your login credentials or your institution to get full access on this article.

      Sign in
      • Published in

        cover image ACM Other conferences
        IHI '10: Proceedings of the 1st ACM International Health Informatics Symposium
        November 2010
        886 pages
        ISBN:9781450300308
        DOI:10.1145/1882992

        Copyright © 2010 ACM

        Permission to make digital or hard copies of all or part of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. Copyrights for components of this work owned by others than ACM must be honored. Abstracting with credit is permitted. To copy otherwise, or republish, to post on servers or to redistribute to lists, requires prior specific permission and/or a fee. Request permissions from [email protected]

        Publisher

        Association for Computing Machinery

        New York, NY, United States

        Publication History

        • Published: 11 November 2010

        Permissions

        Request permissions about this article.

        Request Permissions

        Check for updates

        Qualifiers

        • demonstration
      • Article Metrics

        • Downloads (Last 12 months)0
        • Downloads (Last 6 weeks)0

        Other Metrics

      PDF Format

      View or Download as a PDF file.

      PDF

      eReader

      View online with eReader.

      eReader