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Improvement of Protein-Protein Interaction Prediction by Integrating Template-Based and Template-Free Protein Docking

Authors:
Masahito Ohue

Department of Computer Science, Graduate School of Information Science and Engineering, Tokyo Institute of Technology, W8-76, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN; Education Academy of Computational Life Sciences, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN and Research Fellow of the Japan Society for the Promotion of Science

Department of Computer Science, Graduate School of Information Science and Engineering, Tokyo Institute of Technology, W8-76, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN; Education Academy of Computational Life Sciences, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN and Research Fellow of the Japan Society for the Promotion of Science
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,
Yuri Matsuzaki

Department of Computer Science, Graduate School of Information Science and Engineering, Tokyo Institute of Technology, W8-76, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN

Department of Computer Science, Graduate School of Information Science and Engineering, Tokyo Institute of Technology, W8-76, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN
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,
Takehiro Shimoda

Department of Computer Science, Graduate School of Information Science and Engineering, Tokyo Institute of Technology, W8-76, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN and Education Academy of Computational Life Sciences, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN

Department of Computer Science, Graduate School of Information Science and Engineering, Tokyo Institute of Technology, W8-76, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN and Education Academy of Computational Life Sciences, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN
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,
Takashi Ishida

Department of Computer Science, Graduate School of Information Science and Engineering, Tokyo Institute of Technology, W8-76, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN

Department of Computer Science, Graduate School of Information Science and Engineering, Tokyo Institute of Technology, W8-76, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN
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,
Yutaka Akiyama

Department of Computer Science, Graduate School of Information Science and Engineering, Tokyo Institute of Technology, W8-76, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN and Education Academy of Computational Life Sciences, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN

Department of Computer Science, Graduate School of Information Science and Engineering, Tokyo Institute of Technology, W8-76, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN and Education Academy of Computational Life Sciences, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, JAPAN
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BCB'13: Proceedings of the International Conference on Bioinformatics, Computational Biology and Biomedical InformaticsSeptember 2013Pages 666https://doi.org/10.1145/2506583.2506669

Published:22 September 2013Publication History

BCB'13: Proceedings of the International Conference on Bioinformatics, Computational Biology and Biomedical Informatics

Pages 666

ABSTRACT

No abstract available.

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Improvement of Protein-Protein Interaction Prediction by Integrating Template-Based and Template-Free Protein Docking
1. Applied computing
  1. Life and medical sciences

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BCB'13: Proceedings of the International Conference on Bioinformatics, Computational Biology and Biomedical Informatics
September 2013
987 pages
ISBN:9781450324342
DOI:10.1145/2506583

Copyright © 2013 Owner/Author
Permission to make digital or hard copies of part or all of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. Copyrights for third-party components of this work must be honored. For all other uses, contact the Owner/Author.
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Publication History
- Published: 22 September 2013
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Author Tags
protein-protein interaction
structural biology
template-based docking
template-free docking
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BCB'13 Paper Acceptance Rate43of148submissions,29%Overall Acceptance Rate254of885submissions,29%
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Improvement of Protein-Protein Interaction Prediction by Integrating Template-Based and Template-Free Protein Docking

BCB'13: Proceedings of the International Conference on Bioinformatics, Computational Biology and Biomedical Informatics

ABSTRACT

Cited By

Index Terms

Recommendations

Spatial clustering of protein binding sites for template based protein docking

Structure-based prediction of protein-protein interaction sites

Discovering low-connectivity essential proteins based on protein-protein interaction network

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Improvement of Protein-Protein Interaction Prediction by Integrating Template-Based and Template-Free Protein Docking

BCB'13: Proceedings of the International Conference on Bioinformatics, Computational Biology and Biomedical Informatics

ABSTRACT

Cited By

Index Terms

Recommendations

Spatial clustering of protein binding sites for template based protein docking

Structure-based prediction of protein-protein interaction sites

Discovering low-connectivity essential proteins based on protein-protein interaction network

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In-Cooperation

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