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ReAligner: a program for refining DNA sequence multi-alignments

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Published:19 January 1997Publication History
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References

  1. 1.J.G. Barton and R.F. Sternberg, A strategy for rapid multiple alignment of protein sequences, J. Mol. Biol., 198 (1987), 327-337.Google ScholarGoogle ScholarCross RefCross Ref
  2. 2.G. Churchill and M. Waterman, The Accuracy of DNA Sequences: Estimating Sequence Quality. Genomics 14 (1992), 89-98.Google ScholarGoogle Scholar
  3. 3.F. Corpet, Multiple sequence alignment with hierarchical clustering. Nucl. Acids. Res. 16 (1988), 10881- 10890.Google ScholarGoogle ScholarCross RefCross Ref
  4. 4.D. Feng and R. Doolittle, Progressive sequence alignment as a prerequisite to correct phytogenetic trees. J. Mol. Evol. 25 (1987), 351-360.Google ScholarGoogle ScholarCross RefCross Ref
  5. 5.D. Higgins and P. Sharpe, CLUSTAL: a package for performing multiple sequence alignment on a microcomputer. Gene 73 (1988), 237-244.Google ScholarGoogle ScholarCross RefCross Ref
  6. 6.X. Huang, An improved sequence assembly program. Genomics 33 (1996), 21-31.Google ScholarGoogle ScholarCross RefCross Ref
  7. 7.A. Krogh, M. Brown, I.S. Mian, K. Sjolander and D. Haussler (1994) Hidden Markov models in computational biology, J. Mol. Biol., 235, 1501-1531.Google ScholarGoogle Scholar
  8. 8.W. Taylor, Multiple sequence alignment by a pairwise algorithm. CABIOS 3 (1987), 81-87.Google ScholarGoogle Scholar
  9. 9.M. Waterman and M. Perlwitz, Line geometries for sequence comparison. Bull. Math. Biol. 46 (1984), pp. 567-577.Google ScholarGoogle ScholarCross RefCross Ref

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                  cover image ACM Conferences
                  RECOMB '97: Proceedings of the first annual international conference on Computational molecular biology
                  January 1997
                  354 pages
                  ISBN:0897918827
                  DOI:10.1145/267521

                  Copyright © 1997 ACM

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                  Publication History

                  • Published: 19 January 1997

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                  RECOMB '97 Paper Acceptance Rate43of117submissions,37%Overall Acceptance Rate148of538submissions,28%

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