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New Hash-based Sequence Alignment Algorithm

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Published:31 May 2022Publication History

ABSTRACT

With the gradual deepening of human understanding of the disease and the continuous improvement of diagnosis and treatment, precision medicine, a new medical concept medical model, has been proposed. High-throughput and high-accuracy gene sequence reading and high-accuracy and rapid gene sequence alignment provide the basis for diagnosing and treating precision medicine. This paper presents a new method based on matrix and linked-list to store sequence information. The hash values of the two hash functions are used as the coordinate values of the sequence in the matrix, and they can be used to find the target sequence. The algorithm is compared with five classical comparison algorithms.

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                  BIC 2022: 2022 2nd International Conference on Bioinformatics and Intelligent Computing
                  January 2022
                  551 pages
                  ISBN:9781450395755
                  DOI:10.1145/3523286

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                  Publication History

                  • Published: 31 May 2022

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